Detailed information of deep learning profile BP001086.1

  1. Home
  2. Deep Learning Profile > BP001086.1
This page shows detailed deep learning-derived predictions and motifs for IKZF1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: IKZF1
Model ID: BP001086.1
Cell line/tissue: GM12878
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
JASPAR ID: MA1508.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13422  
Source: ENCSR000EUJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.01 0.01 0.01 -0.00 0.01 -0.00 0.00 0.04 0.03 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.04 0.03 0.00 0.00 0.02 -0.00 0.01 0.00 0.00 -0.00 0.00 ]
T [ 0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.02 -0.00 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 387 385 378 381 374 373 370 388 363 391 388 387 405 343 380 442 514 791 848 914 214 1025 7 2 1296 1183 103 22 131 471 233 539 442 320 341 320 344 354 401 349 348 320 365 400 357 367 347 360 334 377 ]
C [ 260 245 240 271 274 262 301 259 264 240 273 256 241 263 310 259 226 114 110 21 432 65 0 0 0 0 152 73 71 98 197 204 223 243 220 261 286 245 257 273 241 285 266 260 279 305 292 292 298 276 ]
G [ 344 343 344 336 345 331 340 331 351 364 351 337 368 342 320 354 430 251 236 225 625 194 1289 1294 0 0 1040 2 1010 619 524 237 323 366 349 368 329 374 329 355 365 363 339 336 336 308 337 333 351 325 ]
T [ 305 323 334 308 303 330 285 318 318 301 284 316 282 348 286 241 126 140 102 136 25 12 0 0 0 113 1 1199 84 108 342 316 308 367 386 347 337 323 309 319 342 328 326 300 324 316 320 311 313 318 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.01 0.01 0.02 -0.00 0.01 -0.00 0.01 0.04 0.03 -0.00 -0.01 -0.00 0.01 0.00 0.01 0.00 ]
C [ 0.00 -0.00 -0.01 -0.01 -0.02 0.01 0.02 -0.01 -0.02 -0.04 -0.03 0.01 0.01 -0.00 -0.00 -0.01 -0.01 0.00 ]
G [ 0.00 0.01 0.00 0.00 0.00 0.01 0.00 0.04 0.03 -0.00 -0.03 0.02 -0.02 0.02 0.01 0.00 -0.01 0.00 ]
T [ -0.00 -0.01 -0.00 -0.00 0.00 -0.01 -0.02 -0.02 -0.03 -0.01 0.01 -0.02 0.02 -0.01 -0.01 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 2113

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2013

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1458

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1278

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 437

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 357

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 20

CWM

PFM

     

HCWM

2 profiles found for the same TF (IKZF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001087.1 IKZF1 ENCSR441VHN GM12878 Homo sapiens MA1508.2
BP001088.1 IKZF1 ENCSR874AFU GM12878 Homo sapiens MA1508.2
Showing 2 profiles of page 1 from 1 pages
  • 1 (current)