Detailed information of deep learning profile BP001073.1

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This page shows detailed deep learning-derived predictions and motifs for FOXA3 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA3
Model ID: BP001073.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: FOX
JASPAR ID: MA1683.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55318  
Source: ENCSR788DXU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 0.00 0.01 0.00 0.00 -0.00 0.03 0.04 0.05 -0.00 0.05 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 -0.00 -0.00 -0.00 0.00 0.00 0.01 0.00 -0.00 0.04 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.01 -0.00 0.04 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.01 0.00 ]
T [ 0.00 -0.00 -0.00 0.00 0.02 -0.00 0.01 0.00 0.06 0.00 -0.00 0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1130 1119 1080 1208 1121 1163 1160 1096 1098 1113 1275 1188 1141 1304 1232 930 1035 1082 715 1286 1892 1628 319 6 3143 4041 4440 6 4404 1711 1302 1066 1256 1370 1125 1128 1084 1162 1089 1076 1399 1391 1170 1067 1117 1129 1176 1368 1343 1144 ]
C [ 1083 1294 1230 1067 1128 1085 1070 1232 1204 1197 1095 1031 1065 1209 1092 1180 1326 1384 1903 400 602 64 13 50 1310 390 8 3543 17 906 1063 1045 1390 1129 1005 1255 1256 1047 1062 1010 1102 1079 979 1216 1091 1266 1055 1062 1113 1235 ]
G [ 1247 1076 1115 1219 1098 1122 1223 1007 1105 1119 1094 1211 1236 1045 1025 1083 1189 1227 757 328 1525 712 4155 9 30 20 24 13 19 1038 1552 1838 1024 1016 1296 1070 1120 1242 1327 1397 984 1019 1282 1130 1029 1107 1277 1140 1061 1101 ]
T [ 1074 1045 1109 1040 1187 1164 1081 1199 1127 1105 1070 1104 1092 976 1185 1341 984 841 1159 2520 515 2130 47 4469 51 83 62 972 94 879 617 585 864 1019 1108 1081 1074 1083 1056 1051 1049 1045 1103 1121 1297 1032 1026 964 1017 1054 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.00 -0.00 0.01 0.02 0.01 0.02 -0.04 0.04 0.04 0.05 -0.04 0.05 0.01 0.00 0.00 0.00 ]
C [ 0.01 0.01 0.01 0.02 -0.00 -0.01 -0.01 -0.03 0.02 0.03 0.01 -0.02 0.05 -0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 -0.01 0.02 -0.00 0.04 -0.02 -0.03 -0.03 -0.01 -0.03 -0.02 0.00 0.02 0.02 0.01 ]
T [ 0.00 -0.00 -0.00 0.00 0.03 -0.01 0.03 -0.01 0.06 -0.03 -0.00 -0.01 0.04 -0.00 0.00 -0.01 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 831

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 718

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 201

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 193

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 108

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 108

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 34

CWM

PFM

     

HCWM

2 profiles found for the same TF (FOXA3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001071.1 FOXA3 ENCSR092OVN HepG2 Homo sapiens MA1683.2
BP001072.1 FOXA3 ENCSR231ZVN K562 Homo sapiens MA1683.2
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