Detailed information of deep learning profile BP001073.1

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This page shows detailed deep learning-derived predictions and motifs for FOXA3 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA3
Model ID: BP001073.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: FOX
JASPAR ID: MA1683.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55318  
Source: ENCSR788DXU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.01 0.00 -0.00 0.00 0.06 0.00 0.01 -0.00 0.02 0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.01 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.04 -0.00 0.01 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.04 -0.00 0.00 0.01 0.00 0.00 -0.00 -0.00 -0.00 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 0.05 -0.00 0.05 0.04 0.03 -0.00 0.00 0.00 0.01 0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1054 1017 964 1026 1032 1297 1121 1103 1045 1049 1051 1056 1083 1074 1081 1108 1019 864 585 617 879 94 972 62 83 51 4469 47 2130 515 2520 1159 841 984 1341 1185 976 1092 1104 1070 1105 1127 1199 1081 1164 1187 1040 1109 1045 1074 ]
C [ 1101 1061 1140 1277 1107 1029 1130 1282 1019 984 1397 1327 1242 1120 1070 1296 1016 1024 1838 1552 1038 19 13 24 20 30 9 4155 712 1525 328 757 1227 1189 1083 1025 1045 1236 1211 1094 1119 1105 1007 1223 1122 1098 1219 1115 1076 1247 ]
G [ 1235 1113 1062 1055 1266 1091 1216 979 1079 1102 1010 1062 1047 1256 1255 1005 1129 1390 1045 1063 906 17 3543 8 390 1310 50 13 64 602 400 1903 1384 1326 1180 1092 1209 1065 1031 1095 1197 1204 1232 1070 1085 1128 1067 1230 1294 1083 ]
T [ 1144 1343 1368 1176 1129 1117 1067 1170 1391 1399 1076 1089 1162 1084 1128 1125 1370 1256 1066 1302 1711 4404 6 4440 4041 3143 6 319 1628 1892 1286 715 1082 1035 930 1232 1304 1141 1188 1275 1113 1098 1096 1160 1163 1121 1208 1080 1119 1130 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.01 0.00 -0.00 0.04 -0.01 -0.00 -0.03 0.06 -0.01 0.03 -0.01 0.03 0.00 -0.00 -0.00 0.00 ]
C [ 0.01 0.02 0.02 0.00 -0.02 -0.03 -0.01 -0.03 -0.03 -0.02 0.04 -0.00 0.02 -0.01 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 -0.02 0.05 -0.02 0.01 0.03 0.02 -0.03 -0.01 -0.01 -0.00 0.02 0.01 0.01 0.01 ]
T [ 0.00 0.00 0.00 0.01 0.05 -0.04 0.05 0.04 0.04 -0.04 0.02 0.01 0.02 0.01 -0.00 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 831

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 718

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 201

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 193

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 108

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 108

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 34

CWM

PFM

     

HCWM

2 profiles found for the same TF (FOXA3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001071.1 FOXA3 ENCSR092OVN HepG2 Homo sapiens MA1683.2
BP001072.1 FOXA3 ENCSR231ZVN K562 Homo sapiens MA1683.2
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