Detailed information of deep learning profile BP001072.1

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This page shows detailed deep learning-derived predictions and motifs for FOXA3 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA3
Model ID: BP001072.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: FOX
JASPAR ID: MA1683.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55318  
Source: ENCSR231ZVN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.01 0.00 -0.00 0.00 0.06 0.00 0.01 -0.00 0.02 0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.01 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.04 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.00 0.04 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 0.00 0.00 0.05 -0.00 0.06 0.04 0.04 0.00 0.00 0.00 0.01 0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1953 1846 1780 1881 1908 2410 2024 2061 1848 1952 1861 1857 1940 1906 1949 2047 1855 1533 1248 1433 1642 123 1848 44 53 25 7620 86 3196 702 4248 2182 1404 1822 2490 2300 1819 1943 2008 1958 2011 2156 2185 1920 2260 2333 1936 2062 1923 1980 ]
C [ 1644 1632 1725 1957 1658 1608 1672 2049 1600 1557 2232 2211 1991 1751 1680 2124 1580 1715 3049 2108 1610 23 14 17 29 19 6 6927 1325 2401 332 1074 1963 1972 1632 1642 1546 1964 2005 1580 1702 1723 1593 2042 1713 1608 1749 1686 1645 1993 ]
G [ 2058 1641 1650 1638 2003 1644 1967 1463 1597 1524 1528 1589 1519 1902 2052 1446 1735 2134 1505 1525 1340 36 5811 13 590 1873 51 13 72 827 419 3023 2327 2154 1801 1677 1947 1629 1575 1638 1945 1889 1938 1650 1621 1655 1576 1962 1972 1632 ]
T [ 2031 2567 2531 2210 2117 2024 2023 2113 2641 2653 2065 2029 2236 2127 2005 2069 2516 2304 1884 2620 3094 7504 13 7612 7014 5769 9 660 3093 3756 2687 1407 1992 1738 1763 2067 2374 2150 2098 2510 2028 1918 1970 2074 2092 2090 2425 1976 2146 2081 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.01 -0.00 0.04 -0.01 -0.01 -0.04 0.06 -0.01 0.03 -0.01 0.03 0.01 0.00 0.00 0.00 ]
C [ 0.01 0.02 0.01 0.01 -0.02 -0.03 -0.02 -0.04 -0.05 -0.04 0.04 -0.01 0.02 -0.02 0.00 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 -0.03 0.05 -0.03 0.01 0.03 0.02 -0.04 -0.02 -0.01 -0.01 0.02 0.01 0.01 0.01 ]
T [ 0.01 0.00 0.01 0.01 0.05 -0.04 0.06 0.04 0.05 -0.04 0.02 0.02 0.02 0.01 0.00 0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4432

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2080

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 426

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 109

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 104

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 83

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 27

CWM

PFM

     

HCWM

2 profiles found for the same TF (FOXA3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001071.1 FOXA3 ENCSR092OVN HepG2 Homo sapiens MA1683.2
BP001073.1 FOXA3 ENCSR788DXU K562 Homo sapiens MA1683.2
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