Detailed information of deep learning profile BP001059.1

This page shows detailed deep learning-derived predictions and motifs for ELK1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELK1
Model ID: BP001059.1
Cell line/tissue: MCF-7
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0028.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P19419  
Source: ENCSR382WLL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.05 0.04 0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.02 0.05 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.06 0.05 -0.00 0.00 0.02 -0.00 0.01 0.00 0.00 ]
T [ -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 989 951 978 983 988 1026 993 967 960 978 947 991 939 989 943 949 915 955 799 1140 1322 1606 303 265 0 4 5332 5197 652 401 891 1193 939 836 763 845 903 907 893 917 962 926 920 842 880 918 895 918 919 935 ]
C [ 1736 1727 1744 1763 1738 1706 1735 1824 1748 1658 1723 1801 1750 1830 1745 1668 1973 1961 1729 1593 1300 1164 4059 5084 0 2 5 18 346 1586 1006 1526 2027 1485 1732 1820 1629 1733 1754 1584 1638 1746 1666 1729 1739 1617 1689 1724 1635 1646 ]
G [ 1766 1783 1758 1763 1741 1774 1779 1785 1764 1784 1802 1685 1855 1716 1777 1922 1586 1614 2107 1906 1942 2022 888 0 5350 5336 8 0 4318 492 2750 2124 1598 2043 1878 1590 1821 1771 1812 1882 1865 1833 1900 1855 1816 1879 1899 1759 1869 1845 ]
T [ 860 890 871 842 884 845 844 775 879 931 879 874 807 816 886 812 877 821 716 712 787 559 101 2 1 9 6 136 35 2872 704 508 787 987 978 1096 998 940 892 968 886 846 865 925 916 937 868 950 928 925 ]

Hypothetical CWM

A [ 0.00 -0.00 0.00 0.01 -0.01 -0.00 -0.04 -0.02 0.05 0.04 0.01 -0.01 -0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 -0.00 -0.01 0.02 0.05 -0.02 -0.02 -0.02 -0.01 -0.00 0.01 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 -0.00 -0.03 0.06 0.05 -0.02 -0.03 0.02 -0.01 0.01 0.00 0.01 0.00 ]
T [ -0.01 0.00 -0.00 -0.00 -0.02 -0.03 -0.03 -0.01 -0.01 0.01 -0.02 0.02 -0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 425

5 profiles found for the same TF (ELK1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001056.1 ELK1 ENCSR000DZB GM12878 Homo sapiens UN0494.1
BP001057.1 ELK1 ENCSR000ECI HeLa-S3 Homo sapiens MA0028.3
BP001058.1 ELK1 ENCSR000EFU K562 Homo sapiens MA0028.3
BP001060.1 ELK1 ENCSR664OKA IMR-90 Homo sapiens UN0494.1
BP001061.1 ELK1 ENCSR717QSS HepG2 Homo sapiens MA0028.3
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