JASPAR - ELK1 - BP001056.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ELK1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ELK1
Model ID:	BP001056.1
Cell line/tissue:	GM12878
Class:	Tryptophan cluster factors
Family:	Ets-related
JASPAR ID:	UN0494.1
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P19419
Source:	ENCSR000DZB
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 5616

Contribution weight matrix (CWM)

A [	-0.00	0.00	0.00	-0.00	0.00	0.00	-0.00	0.05	0.03	0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	-0.00	0.01	0.04	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.00	0.06	0.05	0.00	0.00	0.02	-0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	0.00	-0.00	-0.00	0.00	0.00	-0.00	0.00	-0.00	0.01	-0.00	-0.00	-0.00	]

Frequency matrix

A [	1069	1057	1072	1098	1023	1129	1067	1041	1072	1089	1082	1073	1084	1066	1068	1068	992	1032	929	1264	1491	1864	375	644	0	1	5602	5487	645	415	940	1277	974	878	847	938	1018	980	981	1042	966	1016	1010	931	990	1001	999	1010	1058	1068	]
C [	1827	1794	1811	1765	1811	1744	1839	1897	1718	1742	1781	1860	1756	1844	1817	1689	2024	1968	1766	1666	1488	1046	4094	4964	0	1	6	7	508	1674	1119	1542	2109	1497	1783	1834	1698	1732	1770	1594	1747	1710	1708	1789	1723	1686	1732	1681	1670	1731	]
G [	1750	1792	1794	1803	1805	1787	1741	1774	1852	1791	1797	1704	1876	1810	1850	1986	1663	1709	2212	1990	1813	2175	1076	7	5616	5611	7	3	4455	500	2782	2210	1703	2120	1947	1685	1859	1851	1880	1938	1954	1962	1901	1925	1848	1879	1904	1890	1899	1823	]
T [	970	973	939	950	977	956	969	904	974	994	956	979	900	896	881	873	937	907	709	696	824	531	71	1	0	3	1	119	8	3027	775	587	830	1121	1039	1159	1041	1053	985	1042	949	928	997	971	1055	1050	981	1035	989	994	]

Hypothetical CWM

A [	-0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.03	-0.02	0.05	0.04	0.00	-0.01	-0.00	-0.00	-0.00	]
C [	0.01	0.00	0.00	-0.01	0.02	0.05	-0.01	-0.02	-0.02	-0.01	0.00	0.01	-0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	0.00	-0.01	0.06	0.05	-0.02	-0.03	0.02	-0.00	0.01	0.00	0.00	]
T [	-0.01	-0.00	-0.00	-0.00	-0.02	-0.04	-0.03	-0.02	-0.01	0.01	-0.03	0.01	-0.00	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 244

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 146

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 99

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 29

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 23

CWM

PFM

HCWM

5 profiles found for the same TF (ELK1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001057.1	ELK1	ENCSR000ECI	HeLa-S3	Homo sapiens	MA0028.3
BP001058.1	ELK1	ENCSR000EFU	K562	Homo sapiens	MA0028.3
BP001059.1	ELK1	ENCSR382WLL	MCF-7	Homo sapiens	MA0028.3
BP001060.1	ELK1	ENCSR664OKA	IMR-90	Homo sapiens	UN0494.1
BP001061.1	ELK1	ENCSR717QSS	HepG2	Homo sapiens	MA0028.3