Detailed information of deep learning profile BP001044.1

This page shows detailed deep learning-derived predictions and motifs for NFIB in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NFIB
Model ID: BP001044.1
Cell line/tissue: HepG2
Class: SMAD/NF-1 DNA-binding domain factors
Family: Nuclear factor 1
JASPAR ID: MA1643.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O00712  
Source: ENCSR414WBQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 54 65 56 64 52 68 54 63 53 52 63 63 60 65 64 61 51 73 18 8 1 0 1 33 98 27 65 54 60 0 1 0 225 132 50 78 70 49 53 44 61 66 43 66 56 45 67 56 57 47 ]
C [ 72 77 81 74 68 79 82 68 64 63 80 67 73 75 85 66 93 63 146 106 1 2 1 223 76 114 73 71 35 0 254 258 26 10 61 52 63 84 77 89 60 82 90 71 65 82 72 67 65 72 ]
G [ 74 58 72 60 85 77 64 86 84 79 64 78 85 81 61 86 65 55 52 14 7 257 258 3 7 75 60 105 56 257 3 1 5 116 129 62 71 67 77 71 84 69 69 61 71 71 73 81 71 83 ]
T [ 60 60 51 62 55 36 60 43 59 66 53 52 42 39 50 47 51 69 44 132 251 1 0 1 79 44 62 30 109 3 2 1 4 2 20 68 56 60 53 56 55 43 58 62 68 62 48 56 67 58 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
G [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 164

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 134

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 111

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 103

2 profiles found for the same TF (NFIB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001045.1 NFIB ENCSR582ZOA MCF-7 Homo sapiens MA1643.2
BP001046.1 NFIB ENCSR702BYX MCF-7 Homo sapiens MA1643.2
Showing 2 profiles of page 1 from 1 pages
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