JASPAR - ZBTB40 - BP000926.1

This page shows detailed deep learning-derived predictions and motifs for ZBTB40 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZBTB40
Model ID:	BP000926.1
Cell line/tissue:	HepG2
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	UN0146.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NUA8
Source:	ENCSR525YFS
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_4

Number of seqlets: 510

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	0.03	0.06	-0.00	0.07	0.08	0.07	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	]
C [	-0.00	0.00	0.01	0.01	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	-0.00	0.00	-0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	0.00	0.00	0.09	-0.00	-0.00	0.00	-0.00	0.00	0.00	]
T [	0.00	-0.00	0.01	-0.00	-0.00	-0.00	0.06	-0.00	0.00	0.00	0.00	0.04	0.08	0.02	0.02	0.00	0.01	]

Frequency matrix

A [	154	135	139	129	127	146	131	123	156	128	153	133	130	109	131	106	124	93	156	55	147	405	498	1	507	510	508	2	25	0	44	56	118	108	117	152	171	213	208	161	222	179	214	186	171	177	196	165	181	172	]
C [	104	90	115	118	129	90	116	128	95	130	130	86	109	109	73	56	66	57	96	138	209	35	0	10	0	0	2	1	66	1	38	62	97	90	76	61	87	87	92	114	68	103	87	76	119	112	85	107	71	106	]
G [	96	132	114	109	108	147	107	105	109	108	93	102	128	99	137	143	145	92	129	39	46	42	6	3	2	0	0	507	3	2	105	58	109	78	86	126	118	82	74	76	89	86	89	125	92	95	93	78	119	82	]
T [	156	153	142	154	146	127	156	154	150	144	134	189	143	193	169	205	175	268	129	278	108	28	6	496	1	0	0	0	416	507	323	334	186	234	231	171	134	128	136	159	131	142	120	123	128	126	136	160	139	150	]

Hypothetical CWM

A [	-0.01	-0.01	-0.01	0.00	-0.02	-0.00	0.03	0.06	-0.03	0.07	0.08	0.07	-0.02	-0.03	-0.04	-0.02	-0.02	0.00	-0.01	-0.01	]
C [	0.01	0.01	0.01	0.01	0.03	0.03	-0.01	-0.00	-0.01	-0.03	-0.03	0.01	-0.02	0.02	-0.04	-0.01	0.01	-0.00	0.01	0.01	]
G [	0.02	0.02	0.01	0.02	-0.00	-0.00	0.01	-0.01	-0.03	-0.03	-0.03	-0.06	0.09	-0.04	-0.01	0.01	0.00	0.01	0.01	0.01	]
T [	-0.00	-0.00	0.01	-0.00	0.01	-0.00	-0.02	-0.03	0.07	-0.03	-0.04	-0.04	-0.03	0.05	0.08	0.02	0.02	0.01	0.01	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 2808

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1134

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 919

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 651

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 210

CWM

PFM

HCWM

6 profiles found for the same TF (ZBTB40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000921.1	ZBTB40	ENCSR158RYZ	K562	Homo sapiens	UN0146.2
BP000922.1	ZBTB40	ENCSR189YYK	GM12878	Homo sapiens	UN0146.2
BP000923.1	ZBTB40	ENCSR200AWS	HepG2	Homo sapiens	UN0146.2
BP000924.1	ZBTB40	ENCSR237VLT	K562	Homo sapiens	UN0146.2
BP000925.1	ZBTB40	ENCSR318LVG	MCF-7	Homo sapiens	UN0146.2
BP000927.1	ZBTB40	ENCSR579YNY	K562	Homo sapiens	UN0146.2