JASPAR - ZBTB40 - BP000924.1

This page shows detailed deep learning-derived predictions and motifs for ZBTB40 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZBTB40
Model ID:	BP000924.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	UN0146.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NUA8
Source:	ENCSR237VLT
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 4848

Contribution weight matrix (CWM)

A [	0.01	0.00	0.02	0.02	0.08	0.06	-0.00	-0.00	0.00	0.00	0.09	-0.00	-0.00	-0.00	0.01	-0.00	0.01	]
C [	0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.12	0.00	0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.00	0.00	]
G [	-0.00	-0.00	0.00	-0.00	-0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.01	0.00	0.00	-0.00	]
T [	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.11	0.12	0.11	0.00	0.07	0.04	-0.00	-0.00	0.00	-0.00	]

Frequency matrix

A [	1464	1290	1471	1280	1351	1399	1378	1305	1344	1353	1426	1509	1518	1475	1641	2276	2216	1665	3073	3000	4630	4003	2	1	0	2	4816	93	272	1217	2729	1230	2729	1910	1989	1832	1811	1472	1748	1434	1408	1540	1625	1519	1359	1611	1413	1452	1572	1518	]
C [	844	1042	869	888	798	776	1170	807	837	732	746	716	703	1135	1210	752	765	894	533	828	34	28	4829	0	0	1	22	69	425	436	340	1222	794	1135	1158	955	919	1286	874	780	887	979	874	916	1076	981	1086	1016	1134	976	]
G [	1040	843	951	726	1096	1142	705	654	971	639	1103	775	754	651	606	650	820	650	663	412	69	532	5	5	1	5	10	6	254	1566	1127	872	449	643	576	748	916	796	766	1200	1204	884	1110	1138	859	986	1109	1075	914	929	]
T [	1500	1673	1557	1954	1603	1531	1595	2082	1696	2124	1573	1848	1873	1587	1391	1170	1047	1639	579	608	115	285	12	4842	4847	4840	0	4680	3897	1629	652	1524	876	1160	1125	1313	1202	1294	1460	1434	1349	1445	1239	1275	1554	1270	1240	1305	1228	1425	]

Hypothetical CWM

A [	0.02	0.01	0.03	0.03	0.08	0.07	-0.03	-0.06	-0.04	-0.03	0.09	-0.02	-0.03	0.00	0.02	-0.00	0.02	]
C [	0.01	0.01	0.00	0.00	-0.03	-0.05	0.12	-0.05	-0.05	-0.05	-0.01	-0.01	0.02	-0.00	-0.00	0.02	0.02	]
G [	0.01	0.01	0.01	-0.01	-0.03	0.03	-0.03	-0.00	-0.04	-0.05	-0.03	-0.02	-0.00	0.04	0.03	0.02	0.00	]
T [	-0.00	0.01	-0.01	-0.00	-0.02	-0.02	-0.01	0.11	0.12	0.11	-0.04	0.08	0.05	0.00	-0.01	0.01	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 11477

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3041

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 549

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 528

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 306

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 123

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 34

CWM

PFM

HCWM

6 profiles found for the same TF (ZBTB40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000921.1	ZBTB40	ENCSR158RYZ	K562	Homo sapiens	UN0146.2
BP000922.1	ZBTB40	ENCSR189YYK	GM12878	Homo sapiens	UN0146.2
BP000923.1	ZBTB40	ENCSR200AWS	HepG2	Homo sapiens	UN0146.2
BP000925.1	ZBTB40	ENCSR318LVG	MCF-7	Homo sapiens	UN0146.2
BP000926.1	ZBTB40	ENCSR525YFS	HepG2	Homo sapiens	UN0146.2
BP000927.1	ZBTB40	ENCSR579YNY	K562	Homo sapiens	UN0146.2