JASPAR - ZBTB40 - BP000921.1

This page shows detailed deep learning-derived predictions and motifs for ZBTB40 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZBTB40
Model ID:	BP000921.1
Cell line/tissue:	K562
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	UN0146.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q9NUA8
Source:	ENCSR158RYZ
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 4682

Contribution weight matrix (CWM)

A [	0.00	-0.00	-0.00	0.04	0.08	0.00	0.12	0.12	0.13	0.00	-0.00	-0.00	0.00	-0.00	0.02	-0.00	-0.00	0.00	0.00	0.00	]
C [	-0.00	0.00	0.00	-0.00	0.00	0.00	-0.00	0.00	0.00	-0.00	0.00	0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	-0.00	0.00	]
G [	0.00	-0.00	-0.00	0.00	-0.00	0.00	0.00	0.00	0.00	0.11	-0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01	0.00	0.00	]
T [	0.00	0.02	0.00	-0.00	-0.00	0.09	-0.00	0.00	-0.00	0.00	0.06	0.11	0.06	0.06	0.00	0.04	0.02	0.00	-0.00	-0.00	]

Frequency matrix

A [	1490	1061	890	832	1084	1642	1047	911	1399	854	811	884	956	693	737	594	608	466	1267	390	2698	3994	4506	6	4661	4673	4644	35	184	78	325	303	3119	523	530	873	1226	2717	3133	846	3024	954	2871	1007	975	907	2706	877	1725	841	]
C [	804	751	1763	1986	1451	806	1869	1366	751	1827	2118	669	635	764	588	450	646	409	532	859	931	207	12	44	8	7	6	10	437	59	205	318	313	453	399	387	397	713	438	2539	442	2243	437	625	2178	2262	566	1417	581	2013	]
G [	1309	1700	859	671	794	1197	695	585	1375	672	611	658	2073	690	802	645	784	427	2049	201	288	285	85	30	6	0	31	4627	37	25	394	269	475	363	392	2557	2373	483	409	442	495	520	629	2265	511	527	660	586	1501	600	]
T [	1079	1170	1170	1193	1353	1037	1071	1820	1157	1329	1142	2471	1018	2535	2555	2993	2644	3380	834	3232	765	196	79	4602	7	2	1	10	4024	4520	3758	3792	775	3343	3361	865	686	769	702	855	721	965	745	785	1018	986	750	1802	875	1228	]

Hypothetical CWM

A [	-0.01	-0.01	-0.00	0.01	-0.00	0.00	0.04	0.08	-0.04	0.12	0.12	0.13	0.01	-0.01	-0.04	-0.01	-0.01	0.03	-0.00	-0.00	0.02	]
C [	0.02	0.01	0.00	0.01	0.04	0.05	0.01	-0.03	0.01	-0.03	-0.03	-0.01	-0.03	0.05	-0.02	-0.02	-0.01	-0.01	0.01	0.02	0.00	]
G [	0.03	0.04	0.02	0.01	-0.00	0.00	0.03	0.00	-0.03	-0.05	-0.04	-0.03	0.11	-0.05	-0.04	-0.01	-0.01	0.02	-0.01	0.01	0.01	]
T [	0.01	0.02	0.03	0.02	0.03	0.02	-0.02	-0.02	0.09	-0.03	-0.05	-0.07	-0.01	0.06	0.11	0.06	0.06	0.00	0.04	0.02	0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4457

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2190

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1723

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 918

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 143

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 96

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 43

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 30

CWM

PFM

HCWM

6 profiles found for the same TF (ZBTB40) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000922.1	ZBTB40	ENCSR189YYK	GM12878	Homo sapiens	UN0146.2
BP000923.1	ZBTB40	ENCSR200AWS	HepG2	Homo sapiens	UN0146.2
BP000924.1	ZBTB40	ENCSR237VLT	K562	Homo sapiens	UN0146.2
BP000925.1	ZBTB40	ENCSR318LVG	MCF-7	Homo sapiens	UN0146.2
BP000926.1	ZBTB40	ENCSR525YFS	HepG2	Homo sapiens	UN0146.2
BP000927.1	ZBTB40	ENCSR579YNY	K562	Homo sapiens	UN0146.2