Detailed information of deep learning profile BP000770.1

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This page shows detailed deep learning-derived predictions and motifs for ESR1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ESR1
Model ID: BP000770.1
Cell line/tissue: MCF-7
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0112.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P03372  
Source: ENCSR463GOT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 0.00 0.03 -0.00 0.00 -0.00 -0.00 0.08 -0.00 -0.00 -0.00 -0.00 0.00 0.03 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
C [ -0.00 0.00 0.01 0.01 -0.00 -0.00 -0.00 -0.00 0.10 -0.00 0.01 0.01 0.00 0.01 -0.00 0.00 0.06 0.06 0.00 -0.00 -0.00 0.00 ]
G [ 0.00 0.00 -0.00 -0.00 0.01 0.06 0.10 0.00 0.00 0.00 0.00 0.01 0.01 -0.00 0.07 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.07 0.00 -0.00 0.00 -0.00 0.00 0.04 -0.00 -0.00 0.00 -0.00 0.02 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 2289 2372 2309 2292 2493 2254 2348 2224 2214 2471 2313 2574 2740 2467 2321 2030 2198 2526 5905 765 66 153 5 8889 1294 2119 1985 1000 1711 4898 572 908 766 1757 2242 2186 2209 2222 2417 2186 2411 2494 2530 2488 2177 2393 2196 2264 2549 2479 ]
C [ 2328 2550 2422 2625 2448 2644 2357 2460 2751 2559 2695 2585 2282 2398 2213 2884 3396 3233 502 41 4 128 9192 19 3815 2906 2632 2307 662 2423 7770 7691 2989 2448 2071 2669 2796 2767 2439 2544 2764 2471 2366 2400 2666 2588 2453 2624 2484 2336 ]
G [ 2821 2361 2713 2590 2365 2613 2607 2778 2518 2267 2514 2208 2480 2716 2654 2157 1797 1798 2856 7495 9606 1129 144 742 2763 2761 3439 335 7234 1062 241 102 801 2581 3218 2717 2189 2423 2312 2433 2278 2422 2578 2625 2573 2301 2557 2556 2298 2378 ]
T [ 2275 2430 2269 2206 2407 2202 2401 2251 2230 2416 2191 2346 2211 2132 2525 2642 2322 2156 450 1412 37 8303 372 63 1841 1927 1657 6071 106 1330 1130 1012 5157 2927 2182 2141 2519 2301 2545 2550 2260 2326 2239 2200 2297 2431 2507 2269 2382 2520 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.00 0.00 0.05 -0.01 0.01 -0.03 -0.09 0.08 0.00 -0.00 0.00 -0.04 0.03 0.06 -0.02 0.00 -0.04 0.01 0.01 0.00 0.00 ]
C [ -0.00 0.01 0.02 0.02 -0.01 -0.06 -0.08 -0.04 0.10 -0.07 0.02 0.02 0.01 0.04 -0.03 0.01 0.07 0.07 0.02 0.00 -0.00 0.00 0.01 ]
G [ 0.01 0.00 -0.00 0.00 0.03 0.07 0.11 0.01 -0.04 0.05 0.01 0.03 0.02 -0.05 0.09 -0.02 -0.06 -0.06 -0.00 0.02 0.02 0.01 0.00 ]
T [ 0.01 0.00 0.01 0.01 -0.04 0.01 -0.03 0.08 0.03 -0.05 0.01 -0.01 0.01 0.06 -0.08 -0.02 0.01 -0.01 0.04 0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 8242

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3594

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2868

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 2004

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 638

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 395

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 351

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 336

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 278

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 179

CWM

PFM

     

HCWM

Motif name: counts.neg_patterns.pattern_0

Num. of seqlets: 43

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 39

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 28

CWM

PFM

     

HCWM

Motif name: counts.neg_patterns.pattern_1

Num. of seqlets: 27

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 25

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 24

CWM

PFM

     

HCWM

7 profiles found for the same TF (ESR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000763.1 ESR1 ENCSR000BIY Ishikawa Homo sapiens MA0112.4
BP000764.1 ESR1 ENCSR000BJS T47D Homo sapiens MA0112.4
BP000765.1 ESR1 ENCSR000BKL Ishikawa Homo sapiens MA0112.4
BP000766.1 ESR1 ENCSR000BKN T47D Homo sapiens MA0112.4
BP000767.1 ESR1 ENCSR000BLL T47D Homo sapiens MA0112.4
BP000768.1 ESR1 ENCSR000BQD T47D Homo sapiens MA0112.4
BP000769.1 ESR1 ENCSR000BQR Ishikawa Homo sapiens MA0112.4
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