Detailed information of deep learning profile BP000767.1

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This page shows detailed deep learning-derived predictions and motifs for ESR1 in T47D using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ESR1
Model ID: BP000767.1
Cell line/tissue: T47D
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0112.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P03372  
Source: ENCSR000BLL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 0.02 -0.00 0.00 -0.00 0.00 0.04 0.00 -0.00 -0.00 -0.00 0.00 0.02 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
C [ -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.05 -0.00 0.01 0.00 -0.00 0.00 -0.00 0.00 0.05 0.04 0.00 -0.00 -0.00 -0.00 -0.00 ]
G [ -0.00 -0.00 -0.00 -0.00 0.00 0.04 0.06 0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.06 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.04 0.00 -0.00 -0.00 -0.00 0.00 0.04 -0.00 -0.00 -0.00 -0.00 0.01 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 198 184 211 205 191 191 207 196 210 211 207 216 214 197 212 167 159 200 531 34 6 24 19 682 120 160 164 50 32 382 34 95 49 181 169 207 194 194 210 220 195 202 199 189 173 197 199 195 216 192 ]
C [ 168 186 174 166 175 183 169 176 168 193 187 198 178 180 147 181 294 265 35 3 2 19 637 5 322 261 219 78 8 218 623 581 263 152 163 142 185 195 189 134 195 158 169 181 183 191 167 184 162 164 ]
G [ 180 170 166 176 170 179 189 188 168 125 157 169 146 170 175 163 139 87 151 608 735 34 12 47 185 169 224 7 691 34 16 4 43 185 240 183 178 152 155 170 160 199 168 171 162 164 199 184 173 188 ]
T [ 204 210 199 203 214 197 185 190 204 221 199 167 212 203 216 239 158 198 33 105 7 673 82 16 123 160 143 615 19 116 77 70 395 232 178 218 193 209 196 226 200 191 214 209 232 198 185 187 199 206 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 0.01 0.03 -0.01 0.00 -0.01 -0.03 0.04 0.01 -0.00 0.00 -0.02 0.02 0.04 -0.01 0.01 -0.02 0.00 0.01 0.01 0.00 ]
C [ -0.00 0.00 0.01 0.01 -0.01 -0.04 -0.03 -0.03 0.06 -0.04 0.02 0.02 0.00 0.03 -0.03 0.01 0.05 0.05 0.01 -0.00 -0.00 -0.00 -0.00 ]
G [ -0.00 0.00 -0.00 -0.00 0.02 0.05 0.06 0.01 -0.04 0.03 0.00 0.02 0.02 -0.04 0.06 -0.03 -0.03 -0.03 -0.00 0.01 0.01 0.01 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.02 0.01 -0.01 0.04 0.02 -0.02 -0.00 -0.00 0.00 0.04 -0.03 -0.01 -0.00 -0.01 0.03 0.01 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 1027

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 431

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 71

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 47

CWM

PFM

     

HCWM

7 profiles found for the same TF (ESR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000763.1 ESR1 ENCSR000BIY Ishikawa Homo sapiens MA0112.4
BP000764.1 ESR1 ENCSR000BJS T47D Homo sapiens MA0112.4
BP000765.1 ESR1 ENCSR000BKL Ishikawa Homo sapiens MA0112.4
BP000766.1 ESR1 ENCSR000BKN T47D Homo sapiens MA0112.4
BP000768.1 ESR1 ENCSR000BQD T47D Homo sapiens MA0112.4
BP000769.1 ESR1 ENCSR000BQR Ishikawa Homo sapiens MA0112.4
BP000770.1 ESR1 ENCSR463GOT MCF-7 Homo sapiens MA0112.4
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