Detailed information of deep learning profile BP000765.1

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This page shows detailed deep learning-derived predictions and motifs for ESR1 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ESR1
Model ID: BP000765.1
Cell line/tissue: Ishikawa
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0112.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P03372  
Source: ENCSR000BKL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.04 -0.00 -0.00 -0.00 -0.00 0.00 0.06 -0.00 0.00 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.01 0.01 0.00 0.00 -0.00 -0.00 0.09 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.09 0.07 0.01 -0.00 -0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.01 0.06 0.06 0.01 -0.00 0.00 0.00 0.01 0.01 -0.00 0.10 -0.00 -0.00 0.00 -0.00 0.01 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 0.00 -0.00 0.00 -0.00 -0.00 0.07 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 782 785 718 674 649 682 634 726 743 708 855 720 640 722 744 714 805 1417 339 306 274 3 2140 449 531 544 35 52 2555 9 288 117 681 565 779 716 643 692 643 676 734 664 658 629 632 740 697 657 625 651 ]
C [ 687 668 716 744 690 665 747 694 641 660 636 627 795 719 713 915 778 225 12 40 298 2788 55 783 670 794 85 35 244 2826 2400 930 560 558 694 785 865 691 736 669 652 674 801 830 798 709 789 771 783 822 ]
G [ 753 733 770 742 777 879 693 667 722 754 743 769 720 714 749 667 656 963 2155 2382 1018 14 330 886 1046 1192 4 2773 42 3 0 97 864 1075 801 646 729 622 751 753 723 883 684 677 726 734 684 707 716 665 ]
T [ 639 675 657 701 745 635 787 774 755 739 627 745 706 706 655 565 622 256 355 133 1271 56 336 743 614 331 2737 1 20 23 173 1717 756 663 587 714 624 856 731 763 752 640 718 725 705 678 691 726 737 723 ]

Hypothetical CWM

   
A [ -0.01 0.00 -0.00 -0.00 0.02 -0.00 -0.00 -0.03 -0.07 0.05 0.00 0.00 -0.00 -0.04 0.02 0.06 -0.02 0.00 -0.04 0.00 0.00 -0.00 0.01 ]
C [ 0.00 0.00 0.02 0.02 0.00 -0.07 -0.05 -0.02 0.09 -0.05 0.02 0.01 0.01 0.05 -0.03 0.02 0.09 0.08 0.03 0.00 -0.00 0.01 0.00 ]
G [ -0.00 0.01 0.00 0.00 0.02 0.07 0.07 0.02 -0.03 0.05 0.01 0.02 0.02 -0.07 0.10 -0.03 -0.06 -0.09 -0.00 0.02 0.02 0.00 -0.00 ]
T [ 0.01 -0.00 -0.00 -0.00 -0.04 -0.00 -0.01 0.04 0.02 -0.03 -0.00 -0.00 0.00 0.07 -0.08 -0.04 -0.01 -0.00 0.03 -0.00 -0.01 0.00 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3490

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1650

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1091

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 893

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 704

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 612

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 563

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 333

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 328

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 84

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 76

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 38

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 35

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 27

CWM

PFM

     

HCWM

7 profiles found for the same TF (ESR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000763.1 ESR1 ENCSR000BIY Ishikawa Homo sapiens MA0112.4
BP000764.1 ESR1 ENCSR000BJS T47D Homo sapiens MA0112.4
BP000766.1 ESR1 ENCSR000BKN T47D Homo sapiens MA0112.4
BP000767.1 ESR1 ENCSR000BLL T47D Homo sapiens MA0112.4
BP000768.1 ESR1 ENCSR000BQD T47D Homo sapiens MA0112.4
BP000769.1 ESR1 ENCSR000BQR Ishikawa Homo sapiens MA0112.4
BP000770.1 ESR1 ENCSR463GOT MCF-7 Homo sapiens MA0112.4
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