Detailed information of deep learning profile BP000758.1

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This page shows detailed deep learning-derived predictions and motifs for FOS in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOS
Model ID: BP000758.1
Cell line/tissue: HeLa-S3
Class: Basic leucine zipper factors (bZIP)
Family: Fos-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P01100  
Source: ENCSR000EZE
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.12 -0.00 -0.00 0.00 0.15 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.14 -0.00 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.01 0.01 0.01 -0.00 0.11 -0.00 0.05 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.13 0.00 -0.00 -0.00 0.15 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2650 2595 2519 2570 2609 2738 2719 2705 2519 2557 2532 2566 2768 2736 2990 2367 2652 2503 2357 2834 2768 3036 2656 2253 2418 4413 45 53 9260 740 16 231 9493 312 2419 2607 2394 2210 2346 2663 2552 2449 2572 2976 2460 2390 2518 2559 2615 2682 ]
C [ 2234 2075 2198 2258 2319 2131 2123 2061 2104 2114 2094 2199 2003 2214 1988 1950 1878 2351 2526 2051 2211 2012 1935 2027 1701 1985 75 55 55 181 9 9261 4 2848 3254 2517 2432 2275 2230 2226 2036 2110 2328 2149 2045 2040 2100 2226 2131 2192 ]
G [ 2073 2128 2169 2122 2033 2056 2094 2117 2266 2088 2340 2181 2162 2236 2172 2097 2332 2053 1906 1941 2087 2204 2638 2899 2936 2624 41 8289 15 8137 32 10 9 1414 1316 2219 2027 2321 2043 1994 2469 2419 2077 1948 2030 2421 2131 2168 2088 2100 ]
T [ 2556 2715 2627 2563 2552 2588 2577 2630 2624 2754 2547 2567 2580 2327 2363 3099 2651 2606 2724 2687 2447 2261 2284 2334 2458 491 9352 1116 183 455 9456 11 7 4939 2524 2170 2660 2707 2894 2630 2456 2535 2536 2440 2978 2662 2764 2560 2679 2539 ]

Hypothetical CWM

   
A [ 0.01 0.00 -0.01 0.00 0.06 -0.09 -0.07 0.13 -0.03 -0.05 0.04 0.15 -0.05 0.01 0.01 0.00 0.00 ]
C [ 0.01 0.02 0.02 0.00 -0.00 0.00 -0.09 0.00 0.07 -0.08 0.14 -0.09 0.04 0.04 0.03 0.02 0.02 ]
G [ 0.01 0.02 0.03 0.04 0.03 -0.07 0.13 -0.10 0.06 -0.03 -0.09 0.01 -0.00 0.00 0.02 0.02 0.01 ]
T [ 0.00 0.00 0.01 0.01 -0.05 0.13 0.05 -0.04 -0.03 0.15 -0.07 -0.09 0.06 0.00 -0.01 0.00 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1644

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 412

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 321

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 205

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 72

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 40

CWM

PFM

     

HCWM

9 profiles found for the same TF (FOS) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000753.1 FOS ENCSR000DON MCF 10A Homo sapiens MA1141.2
BP000754.1 FOS ENCSR000DOO MCF 10A Homo sapiens MA1141.2
BP000755.1 FOS ENCSR000DOP MCF 10A Homo sapiens MA1141.2
BP000756.1 FOS ENCSR000DOT MCF 10A Homo sapiens MA1141.2
BP000757.1 FOS ENCSR000EVU endothelial cell of umbilical vein Homo sapiens MA1141.2
BP000759.1 FOS ENCSR000FAI K562 Homo sapiens MA1141.2
BP000760.1 FOS ENCSR124AIG IMR-90 Homo sapiens MA1141.2
BP000761.1 FOS ENCSR569XNP MCF-7 Homo sapiens MA1141.2
BP000762.1 FOS ENCSR572DUR WTC11 Homo sapiens MA1134.2
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