Detailed information of deep learning profile BP000759.1

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This page shows detailed deep learning-derived predictions and motifs for FOS in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOS
Model ID: BP000759.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: Fos-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P01100  
Source: ENCSR000FAI
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.14 -0.00 -0.00 0.00 0.12 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.04 0.00 0.10 -0.00 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.00 0.11 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.13 -0.00 -0.00 -0.00 0.12 -0.00 -0.00 0.03 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 939 1002 894 976 870 947 851 893 952 914 921 882 870 967 916 976 962 1013 813 821 1802 1 4 3697 60 22 47 3685 91 835 772 773 736 818 837 856 975 925 903 848 885 961 884 891 996 960 868 819 903 891 ]
C [ 914 845 934 891 882 895 968 1003 986 932 883 972 989 971 906 897 994 844 948 602 551 1 7 0 3419 2 3638 4 1076 1314 1330 1189 1032 910 930 978 958 1003 1012 983 985 924 931 1025 976 986 929 932 889 888 ]
G [ 905 917 971 927 1033 858 913 869 881 989 990 967 970 934 991 997 1011 1070 1019 1486 1301 0 3677 3 33 11 11 10 748 711 848 711 810 984 901 991 807 799 855 912 891 949 945 900 846 834 927 895 919 1005 ]
T [ 943 937 902 907 916 1001 969 936 882 866 907 880 872 829 888 831 734 774 921 792 47 3699 13 1 189 3666 5 2 1786 841 751 1028 1123 989 1033 876 961 974 931 958 940 867 941 885 883 921 977 1055 990 917 ]

Hypothetical CWM

   
A [ 0.01 0.01 -0.00 0.01 0.06 -0.07 -0.05 0.14 -0.03 -0.03 0.03 0.12 -0.04 0.01 0.02 0.01 0.00 ]
C [ 0.02 0.02 0.02 0.00 -0.00 0.02 -0.04 -0.05 0.05 -0.06 0.10 -0.07 0.04 0.04 0.02 0.02 0.02 ]
G [ 0.02 0.02 0.02 0.03 0.04 -0.07 0.11 -0.05 0.06 -0.03 -0.04 0.02 -0.01 0.00 0.03 0.02 0.02 ]
T [ 0.00 0.01 0.02 0.01 -0.04 0.13 0.01 -0.03 -0.02 0.12 -0.05 -0.07 0.07 0.01 -0.01 0.01 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7393

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 474

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 143

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 138

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 138

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 117

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 51

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 51

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 24

CWM

PFM

     

HCWM

9 profiles found for the same TF (FOS) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000753.1 FOS ENCSR000DON MCF 10A Homo sapiens MA1141.2
BP000754.1 FOS ENCSR000DOO MCF 10A Homo sapiens MA1141.2
BP000755.1 FOS ENCSR000DOP MCF 10A Homo sapiens MA1141.2
BP000756.1 FOS ENCSR000DOT MCF 10A Homo sapiens MA1141.2
BP000757.1 FOS ENCSR000EVU endothelial cell of umbilical vein Homo sapiens MA1141.2
BP000758.1 FOS ENCSR000EZE HeLa-S3 Homo sapiens MA1141.2
BP000760.1 FOS ENCSR124AIG IMR-90 Homo sapiens MA1141.2
BP000761.1 FOS ENCSR569XNP MCF-7 Homo sapiens MA1141.2
BP000762.1 FOS ENCSR572DUR WTC11 Homo sapiens MA1134.2
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