Detailed information of deep learning profile BP000754.1

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This page shows detailed deep learning-derived predictions and motifs for FOS in MCF 10A using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOS
Model ID: BP000754.1
Cell line/tissue: MCF 10A
Class: Basic leucine zipper factors (bZIP)
Family: Fos-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P01100  
Source: ENCSR000DOO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.02 -0.00 0.00 0.14 -0.00 -0.00 0.00 0.13 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.05 -0.00 0.13 -0.00 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.00 0.14 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.14 0.00 -0.00 -0.00 0.11 0.00 -0.00 0.02 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 3737 3805 3496 3487 3690 3661 3191 3438 3392 3694 3406 3641 3611 3825 3167 3402 5511 14 17 12683 444 521 39 12516 986 3272 3011 3148 2812 3043 3144 3708 4069 3391 3652 3236 3241 3980 3286 3337 4093 3362 3301 3318 3338 3350 3353 3503 4039 3386 ]
C [ 2703 2611 2851 3086 2967 2734 2787 3199 3295 2863 2646 2770 3188 2673 3216 2065 2190 46 6 21 10229 30 12714 62 3510 3630 4085 3724 2892 2803 2920 3016 2677 2977 3512 3407 3446 2851 2787 3506 2815 3389 2866 2747 2701 2705 2708 2694 2678 2668 ]
G [ 2925 2716 2904 2695 2758 3217 3319 2803 2757 2973 3540 3274 2831 3122 2909 4004 4455 13 12712 30 137 132 11 122 2622 2429 2546 2333 2444 3337 2530 2826 2706 2462 2429 2480 2601 2613 3223 2543 2631 2555 2682 2688 2658 3302 3277 3279 2692 3403 ]
T [ 3409 3642 3523 3506 3359 3162 3477 3334 3330 3244 3182 3089 3144 3154 3482 3303 618 12701 39 40 1964 12091 10 74 5656 3443 3132 3569 4626 3591 4180 3224 3322 3944 3181 3651 3486 3330 3478 3388 3235 3468 3925 4021 4077 3417 3436 3298 3365 3317 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.01 -0.00 0.06 -0.08 -0.06 0.14 -0.01 -0.01 0.06 0.13 -0.05 0.01 0.00 -0.01 -0.01 ]
C [ 0.01 0.01 0.01 0.00 -0.00 0.00 -0.09 -0.02 0.07 -0.06 0.13 -0.06 0.04 0.04 0.02 0.02 0.01 ]
G [ 0.01 0.02 0.02 0.04 0.04 -0.07 0.14 -0.04 0.08 0.01 -0.09 -0.00 -0.00 0.00 0.01 0.01 0.01 ]
T [ -0.01 -0.01 0.00 0.01 -0.05 0.14 0.07 -0.02 -0.01 0.12 -0.06 -0.08 0.05 -0.00 -0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5349

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3627

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2350

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1922

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1105

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 639

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 503

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 446

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 255

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 187

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 170

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 166

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 110

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 80

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 58

CWM

PFM

     

HCWM

Motif name: counts.neg_patterns.pattern_0

Num. of seqlets: 42

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_25

Num. of seqlets: 25

CWM

PFM

     

HCWM

9 profiles found for the same TF (FOS) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000753.1 FOS ENCSR000DON MCF 10A Homo sapiens MA1141.2
BP000755.1 FOS ENCSR000DOP MCF 10A Homo sapiens MA1141.2
BP000756.1 FOS ENCSR000DOT MCF 10A Homo sapiens MA1141.2
BP000757.1 FOS ENCSR000EVU endothelial cell of umbilical vein Homo sapiens MA1141.2
BP000758.1 FOS ENCSR000EZE HeLa-S3 Homo sapiens MA1141.2
BP000759.1 FOS ENCSR000FAI K562 Homo sapiens MA1141.2
BP000760.1 FOS ENCSR124AIG IMR-90 Homo sapiens MA1141.2
BP000761.1 FOS ENCSR569XNP MCF-7 Homo sapiens MA1141.2
BP000762.1 FOS ENCSR572DUR WTC11 Homo sapiens MA1134.2
Showing 9 profiles of page 1 from 1 pages
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