Detailed information of deep learning profile BP000758.1

  1. Home
  2. Deep Learning Profile > BP000758.1
This page shows detailed deep learning-derived predictions and motifs for FOS in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOS
Model ID: BP000758.1
Cell line/tissue: HeLa-S3
Class: Basic leucine zipper factors (bZIP)
Family: Fos-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P01100  
Source: ENCSR000EZE
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.15 -0.00 -0.00 0.00 0.13 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.05 -0.00 0.11 -0.00 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.00 0.14 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.15 0.00 -0.00 -0.00 0.12 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2539 2679 2560 2764 2662 2978 2440 2536 2535 2456 2630 2894 2707 2660 2170 2524 4939 7 11 9456 455 183 1116 9352 491 2458 2334 2284 2261 2447 2687 2724 2606 2651 3099 2363 2327 2580 2567 2547 2754 2624 2630 2577 2588 2552 2563 2627 2715 2556 ]
C [ 2100 2088 2168 2131 2421 2030 1948 2077 2419 2469 1994 2043 2321 2027 2219 1316 1414 9 10 32 8137 15 8289 41 2624 2936 2899 2638 2204 2087 1941 1906 2053 2332 2097 2172 2236 2162 2181 2340 2088 2266 2117 2094 2056 2033 2122 2169 2128 2073 ]
G [ 2192 2131 2226 2100 2040 2045 2149 2328 2110 2036 2226 2230 2275 2432 2517 3254 2848 4 9261 9 181 55 55 75 1985 1701 2027 1935 2012 2211 2051 2526 2351 1878 1950 1988 2214 2003 2199 2094 2114 2104 2061 2123 2131 2319 2258 2198 2075 2234 ]
T [ 2682 2615 2559 2518 2390 2460 2976 2572 2449 2552 2663 2346 2210 2394 2607 2419 312 9493 231 16 740 9260 53 45 4413 2418 2253 2656 3036 2768 2834 2357 2503 2652 2367 2990 2736 2768 2566 2532 2557 2519 2705 2719 2738 2609 2570 2519 2595 2650 ]

Hypothetical CWM

   
A [ 0.01 0.00 -0.01 0.00 0.06 -0.09 -0.07 0.15 -0.03 -0.04 0.05 0.13 -0.05 0.01 0.01 0.00 0.00 ]
C [ 0.01 0.02 0.02 0.00 -0.00 0.01 -0.09 -0.03 0.06 -0.10 0.13 -0.07 0.03 0.04 0.03 0.02 0.01 ]
G [ 0.02 0.02 0.03 0.04 0.04 -0.09 0.14 -0.08 0.07 0.00 -0.09 0.00 -0.00 0.00 0.02 0.02 0.01 ]
T [ 0.00 0.00 0.01 0.01 -0.05 0.15 0.04 -0.05 -0.03 0.13 -0.07 -0.09 0.06 0.00 -0.01 0.00 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1644

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 412

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 321

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 205

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 72

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 40

CWM

PFM

     

HCWM

9 profiles found for the same TF (FOS) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000753.1 FOS ENCSR000DON MCF 10A Homo sapiens MA1141.2
BP000754.1 FOS ENCSR000DOO MCF 10A Homo sapiens MA1141.2
BP000755.1 FOS ENCSR000DOP MCF 10A Homo sapiens MA1141.2
BP000756.1 FOS ENCSR000DOT MCF 10A Homo sapiens MA1141.2
BP000757.1 FOS ENCSR000EVU endothelial cell of umbilical vein Homo sapiens MA1141.2
BP000759.1 FOS ENCSR000FAI K562 Homo sapiens MA1141.2
BP000760.1 FOS ENCSR124AIG IMR-90 Homo sapiens MA1141.2
BP000761.1 FOS ENCSR569XNP MCF-7 Homo sapiens MA1141.2
BP000762.1 FOS ENCSR572DUR WTC11 Homo sapiens MA1134.2
Showing 9 profiles of page 1 from 1 pages
  • 1 (current)