Detailed information of deep learning profile BP000757.1

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This page shows detailed deep learning-derived predictions and motifs for FOS in endothelial cell of umbilical vein using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOS
Model ID: BP000757.1
Cell line/tissue: endothelial cell of umbilical vein
Class: Basic leucine zipper factors (bZIP)
Family: Fos-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P01100  
Source: ENCSR000EVU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.11 -0.00 -0.00 0.00 0.13 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.14 -0.00 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.01 0.01 0.01 -0.00 0.11 -0.00 0.05 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.12 0.00 -0.00 -0.00 0.14 0.00 -0.00 0.03 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 5648 5624 5496 5548 5432 6093 5852 5926 5691 5611 5623 5655 5865 5834 6183 5316 5776 5642 5294 5606 5790 7057 6098 4726 5266 10517 74 68 19397 2035 3 171 19879 692 5296 5470 5048 4988 5180 5638 5651 5602 5462 6023 5245 5296 5658 5737 5578 5566 ]
C [ 4493 4129 4493 4519 4668 4143 4264 4091 4240 4194 4028 4488 4020 4278 3956 3921 3723 4201 4620 4142 4510 4185 3842 4032 3564 3795 253 65 117 1012 2 19768 4 6219 6262 4957 4494 4148 4611 4886 4400 4056 4467 4371 4426 4262 4235 4408 4214 4318 ]
G [ 4155 4252 4174 4237 4111 4135 4198 4286 4575 4227 4665 4310 4398 4676 4474 4465 4659 4207 4232 4452 4357 4161 4945 6137 5821 4541 42 16236 46 16161 1 2 44 3175 2745 4692 4122 4635 4207 4135 4436 4647 4268 4141 4098 4488 4340 4210 4164 4199 ]
T [ 5645 5936 5778 5637 5730 5570 5627 5638 5435 5909 5625 5488 5658 5153 5328 6239 5783 5891 5795 5741 5284 4538 5056 5046 5290 1088 19572 3572 381 733 19935 0 14 9855 5638 4822 6277 6170 5943 5282 5454 5636 5744 5406 6172 5895 5708 5586 5985 5858 ]

Hypothetical CWM

   
A [ 0.01 0.01 -0.00 0.01 0.06 -0.08 -0.07 0.12 -0.02 -0.04 0.04 0.13 -0.05 0.01 0.01 -0.00 -0.01 ]
C [ 0.01 0.02 0.02 0.01 0.01 0.02 -0.07 0.00 0.08 -0.05 0.14 -0.06 0.04 0.04 0.03 0.02 0.02 ]
G [ 0.02 0.02 0.03 0.04 0.03 -0.06 0.13 -0.07 0.06 -0.02 -0.07 0.02 0.01 0.01 0.02 0.02 0.02 ]
T [ -0.01 -0.00 0.01 0.00 -0.05 0.12 0.04 -0.03 -0.02 0.14 -0.07 -0.08 0.06 0.01 -0.00 0.01 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3647

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1890

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1701

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 535

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 460

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 321

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 294

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 277

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 147

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 143

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 120

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 112

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 111

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 92

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 76

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 45

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 23

CWM

PFM

     

HCWM

9 profiles found for the same TF (FOS) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000753.1 FOS ENCSR000DON MCF 10A Homo sapiens MA1141.2
BP000754.1 FOS ENCSR000DOO MCF 10A Homo sapiens MA1141.2
BP000755.1 FOS ENCSR000DOP MCF 10A Homo sapiens MA1141.2
BP000756.1 FOS ENCSR000DOT MCF 10A Homo sapiens MA1141.2
BP000758.1 FOS ENCSR000EZE HeLa-S3 Homo sapiens MA1141.2
BP000759.1 FOS ENCSR000FAI K562 Homo sapiens MA1141.2
BP000760.1 FOS ENCSR124AIG IMR-90 Homo sapiens MA1141.2
BP000761.1 FOS ENCSR569XNP MCF-7 Homo sapiens MA1141.2
BP000762.1 FOS ENCSR572DUR WTC11 Homo sapiens MA1134.2
Showing 9 profiles of page 1 from 1 pages
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