Detailed information of deep learning profile BP000757.1

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This page shows detailed deep learning-derived predictions and motifs for FOS in endothelial cell of umbilical vein using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOS
Model ID: BP000757.1
Cell line/tissue: endothelial cell of umbilical vein
Class: Basic leucine zipper factors (bZIP)
Family: Fos-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P01100  
Source: ENCSR000EVU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.03 -0.00 0.00 0.14 -0.00 -0.00 0.00 0.12 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.05 -0.00 0.11 -0.00 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.01 0.01 0.01 -0.00 0.14 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.13 0.00 -0.00 -0.00 0.11 -0.00 -0.00 0.03 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 5858 5985 5586 5708 5895 6172 5406 5744 5636 5454 5282 5943 6170 6277 4822 5638 9855 14 0 19935 733 381 3572 19572 1088 5290 5046 5056 4538 5284 5741 5795 5891 5783 6239 5328 5153 5658 5488 5625 5909 5435 5638 5627 5570 5730 5637 5778 5936 5645 ]
C [ 4199 4164 4210 4340 4488 4098 4141 4268 4647 4436 4135 4207 4635 4122 4692 2745 3175 44 2 1 16161 46 16236 42 4541 5821 6137 4945 4161 4357 4452 4232 4207 4659 4465 4474 4676 4398 4310 4665 4227 4575 4286 4198 4135 4111 4237 4174 4252 4155 ]
G [ 4318 4214 4408 4235 4262 4426 4371 4467 4056 4400 4886 4611 4148 4494 4957 6262 6219 4 19768 2 1012 117 65 253 3795 3564 4032 3842 4185 4510 4142 4620 4201 3723 3921 3956 4278 4020 4488 4028 4194 4240 4091 4264 4143 4668 4519 4493 4129 4493 ]
T [ 5566 5578 5737 5658 5296 5245 6023 5462 5602 5651 5638 5180 4988 5048 5470 5296 692 19879 171 3 2035 19397 68 74 10517 5266 4726 6098 7057 5790 5606 5294 5642 5776 5316 6183 5834 5865 5655 5623 5611 5691 5926 5852 6093 5432 5548 5496 5624 5648 ]

Hypothetical CWM

   
A [ 0.01 0.01 -0.00 0.01 0.06 -0.08 -0.07 0.14 -0.02 -0.03 0.04 0.12 -0.05 0.00 0.01 -0.00 -0.01 ]
C [ 0.02 0.02 0.02 0.01 0.01 0.02 -0.07 -0.02 0.06 -0.07 0.13 -0.06 0.03 0.04 0.03 0.02 0.02 ]
G [ 0.02 0.02 0.03 0.04 0.04 -0.06 0.14 -0.05 0.08 0.00 -0.07 0.02 0.01 0.01 0.02 0.02 0.01 ]
T [ -0.01 -0.00 0.01 0.01 -0.05 0.13 0.04 -0.04 -0.02 0.12 -0.07 -0.08 0.06 0.01 -0.00 0.01 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3647

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1890

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1701

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 535

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 460

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 321

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 294

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 277

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 147

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 143

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 120

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 112

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 111

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 92

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 76

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 45

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 23

CWM

PFM

     

HCWM

9 profiles found for the same TF (FOS) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000753.1 FOS ENCSR000DON MCF 10A Homo sapiens MA1141.2
BP000754.1 FOS ENCSR000DOO MCF 10A Homo sapiens MA1141.2
BP000755.1 FOS ENCSR000DOP MCF 10A Homo sapiens MA1141.2
BP000756.1 FOS ENCSR000DOT MCF 10A Homo sapiens MA1141.2
BP000758.1 FOS ENCSR000EZE HeLa-S3 Homo sapiens MA1141.2
BP000759.1 FOS ENCSR000FAI K562 Homo sapiens MA1141.2
BP000760.1 FOS ENCSR124AIG IMR-90 Homo sapiens MA1141.2
BP000761.1 FOS ENCSR569XNP MCF-7 Homo sapiens MA1141.2
BP000762.1 FOS ENCSR572DUR WTC11 Homo sapiens MA1134.2
Showing 9 profiles of page 1 from 1 pages
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