Detailed information of deep learning profile BP000698.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000698.1
Cell line/tissue: A549
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR000BPT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 0.05 0.05 0.00 -0.00 0.00 -0.00 -0.00 ]
C [ -0.00 -0.00 0.01 0.02 0.04 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ -0.00 -0.00 -0.00 0.00 0.00 0.07 0.05 0.00 0.00 0.02 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.01 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 1820 1810 1707 1758 1719 1750 1772 1815 1805 1641 1797 1752 1721 1746 1781 1627 1700 1602 1839 1774 1709 3229 3660 1905 573 2435 1 2 8444 8415 1090 1027 1677 1753 1694 1720 1592 1607 1631 1623 1691 1790 1642 1694 1680 1647 1712 1751 1592 1752 ]
C [ 2595 2490 2531 2441 2539 2500 2534 2588 2529 2657 2543 2502 2505 2588 2454 2707 2600 2697 2828 2598 2314 1697 1344 3185 5874 6064 0 21 35 24 611 2239 1797 2339 2871 2190 2415 2650 2385 2616 2551 2336 2642 2510 2375 2567 2493 2347 2530 2579 ]
G [ 2595 2546 2645 2695 2701 2715 2722 2590 2673 2689 2666 2597 2717 2658 2794 2617 2693 2772 2444 2776 3341 2359 1853 2225 2006 54 8558 8523 50 8 6773 713 4083 3493 2591 2883 2939 2556 2792 2675 2740 2746 2727 2755 2918 2782 2704 2799 2831 2614 ]
T [ 1550 1714 1677 1666 1601 1595 1532 1567 1553 1573 1554 1709 1617 1568 1531 1609 1567 1489 1449 1412 1196 1275 1703 1245 107 7 1 14 31 113 86 4581 1003 975 1404 1767 1614 1747 1752 1646 1578 1688 1549 1601 1587 1564 1651 1663 1607 1615 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.01 -0.00 -0.01 0.00 -0.04 -0.03 0.05 0.05 0.00 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 -0.01 0.01 0.02 0.05 -0.01 -0.02 -0.02 -0.01 -0.00 0.01 0.00 0.01 0.00 ]
G [ 0.01 -0.00 -0.00 -0.00 0.01 -0.01 0.07 0.05 -0.02 -0.03 0.02 -0.01 0.01 0.01 0.01 ]
T [ -0.00 0.00 0.01 0.00 -0.03 -0.05 -0.03 -0.01 -0.00 0.00 -0.02 0.02 -0.01 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 534

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 239

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 195

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000695.1 ELF1 ENCSR000BMB GM12878 Homo sapiens MA0473.4
BP000696.1 ELF1 ENCSR000BMD K562 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000699.1 ELF1 ENCSR000BSS MCF-7 Homo sapiens MA0473.4
BP000700.1 ELF1 ENCSR000BTA SK-N-SH Homo sapiens MA0473.4
BP000701.1 ELF1 ENCSR000BVH HCT116 Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000704.1 ELF1 ENCSR502NRF MCF-7 Homo sapiens MA0473.4
BP000705.1 ELF1 ENCSR502OEK K562 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages