Detailed information of deep learning profile BP000695.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000695.1
Cell line/tissue: GM12878
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR000BMB
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.01 -0.00 0.03 -0.00 0.00 0.06 0.07 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.02 0.00 -0.00 -0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.05 0.06 -0.00 0.00 0.00 -0.00 -0.00 0.01 0.00 ]

Frequency matrix

       
A [ 2998 3033 3082 2876 3061 3015 2895 2946 2920 2821 3040 2953 2990 3282 3198 2791 3088 2585 1522 1812 8457 35 201 13 1 0 7 155 2261 2816 2186 2095 2813 2733 2825 2875 2753 2809 2988 2941 3044 2966 2829 2832 2923 2810 2884 2940 2909 2969 ]
C [ 5522 5600 5348 5501 5502 5464 5635 5664 5589 5582 5507 5537 5736 5566 5385 6170 5710 5266 7006 8432 1665 13641 1 4 16551 16556 336 4065 4809 4146 5000 6450 5114 4937 5296 5160 5352 5511 5168 5387 5445 5267 5354 5492 5189 5445 5459 5420 5327 5320 ]
G [ 4863 4819 4976 5078 4766 4803 4940 4824 4899 4976 4781 5040 4820 4700 5132 4725 4346 5537 4750 3416 4724 1167 10 4 0 0 9859 11262 5405 2739 3460 4588 5252 5799 5388 5226 5314 4918 5018 4945 4860 4880 5082 4980 4983 5027 4901 4914 4917 5023 ]
T [ 3173 3104 3150 3101 3227 3274 3086 3122 3148 3177 3228 3026 3010 3008 2841 2870 3412 3168 3278 2896 1710 1713 16344 16535 4 0 6354 1074 4081 6855 5910 3423 3377 3087 3047 3295 3137 3318 3382 3283 3207 3443 3291 3252 3461 3274 3312 3282 3403 3244 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.01 -0.01 0.02 -0.03 0.01 0.00 -0.03 -0.04 -0.05 -0.03 -0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.02 -0.01 0.03 -0.03 -0.03 0.06 0.07 -0.00 0.02 0.00 0.00 0.00 0.01 ]
G [ 0.00 0.01 0.01 0.00 0.02 0.01 -0.01 -0.02 -0.02 -0.02 0.05 0.02 0.01 -0.00 -0.00 0.01 ]
T [ 0.00 -0.00 -0.00 -0.00 -0.01 0.00 0.05 0.06 -0.02 -0.02 0.01 -0.01 0.00 0.01 0.01 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 884

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 884

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 211

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 120

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 54

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 53

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 20

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000696.1 ELF1 ENCSR000BMD K562 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000698.1 ELF1 ENCSR000BPT A549 Homo sapiens MA0473.4
BP000699.1 ELF1 ENCSR000BSS MCF-7 Homo sapiens MA0473.4
BP000700.1 ELF1 ENCSR000BTA SK-N-SH Homo sapiens MA0473.4
BP000701.1 ELF1 ENCSR000BVH HCT116 Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000704.1 ELF1 ENCSR502NRF MCF-7 Homo sapiens MA0473.4
BP000705.1 ELF1 ENCSR502OEK K562 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages