Detailed information of deep learning profile BP000693.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000693.1
Cell line/tissue: MCF-7
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR620DUQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.09 0.00 0.01 0.00 0.00 0.07 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.14 -0.00 0.00 0.08 -0.00 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.00 0.09 0.00 -0.00 0.05 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.01 0.00 -0.00 0.09 0.00 0.00 0.00 -0.00 0.08 -0.00 -0.00 0.02 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 2533 2661 2797 2770 2687 2722 2667 2484 2491 2380 2609 2596 2369 2838 2675 2790 2628 1828 2182 5283 3 16 8969 0 5682 402 107 8881 440 2666 3476 2676 2584 2547 2462 2545 2635 2679 2778 2737 2621 2804 2416 2577 2524 2544 2652 2417 2599 2685 ]
C [ 2006 1881 1882 1849 1887 2033 1849 1987 2088 2150 1963 2058 1974 1798 1997 2054 2029 2241 1364 687 28 33 2 8991 1173 66 8773 10 3304 2812 1493 2012 1977 1974 2064 2110 1925 1921 1976 1859 2050 1923 1930 2041 2007 1979 1850 2058 2075 1930 ]
G [ 2010 1980 2003 1957 1915 1835 1885 1963 1789 1856 1817 1808 2175 1984 1918 1879 1846 1433 2658 2899 1 8834 10 5 2113 68 106 68 1028 1230 2131 1867 1814 1845 1766 1808 1893 1839 1916 1814 1841 1771 1919 1789 1922 1841 1964 1975 1900 1909 ]
T [ 2455 2482 2322 2428 2515 2414 2603 2570 2636 2618 2615 2542 2486 2384 2414 2281 2501 3502 2800 135 8972 121 23 8 36 8468 18 45 4232 2296 1904 2449 2629 2638 2712 2541 2551 2565 2334 2594 2492 2506 2739 2597 2551 2640 2538 2554 2430 2480 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.01 -0.01 0.04 -0.07 -0.05 0.09 -0.10 0.01 -0.02 -0.00 0.07 -0.04 0.01 0.01 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.01 0.01 -0.02 -0.08 0.14 -0.03 -0.03 0.08 -0.05 0.03 0.02 0.00 0.01 0.01 ]
G [ 0.00 0.01 0.00 0.02 0.03 -0.06 0.09 -0.05 -0.03 0.13 -0.07 -0.01 0.00 -0.01 0.00 0.01 0.00 0.00 ]
T [ 0.00 -0.00 0.01 0.01 -0.05 0.09 -0.01 -0.01 0.01 -0.10 0.08 -0.05 -0.06 0.03 -0.00 -0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 7792

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 5816

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 4226

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 786

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 560

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 393

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 220

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 214

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 205

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 183

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 129

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 101

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 89

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 48

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 45

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 42

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 28

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 27

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000691.1 CREB1 ENCSR331ORD HepG2 Homo sapiens MA0018.5
BP000692.1 CREB1 ENCSR471WXT K562 Homo sapiens MA0018.5
BP000694.1 CREB1 ENCSR897JAS MCF-7 Homo sapiens MA0018.5
Showing 3 profiles of page 2 from 2 pages