Detailed information of deep learning profile BP000692.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000692.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR471WXT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.03 0.00 0.00 0.00 0.00 0.02 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.04 -0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.03 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.02 0.00 0.00 0.00 -0.00 0.03 -0.00 -0.00 0.01 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 262 280 232 267 264 285 288 266 271 243 243 280 256 278 278 250 189 229 464 9 8 1043 0 763 23 50 1046 41 346 321 273 224 248 235 205 266 297 285 260 266 250 253 253 270 263 279 289 285 294 272 ]
C [ 297 309 301 301 303 283 259 303 293 312 332 308 323 274 267 292 371 196 176 20 8 1 1069 235 12 1011 6 394 313 231 357 318 267 314 280 291 274 263 311 293 270 296 319 285 267 278 276 267 254 300 ]
G [ 257 246 290 291 257 268 264 272 278 272 258 272 235 303 312 306 185 317 403 4 976 4 5 8 6 15 13 144 187 332 226 260 282 318 292 269 271 305 281 261 307 266 269 242 285 253 267 255 255 300 ]
T [ 266 247 259 223 258 246 271 241 240 255 249 222 268 227 225 234 337 340 39 1049 90 34 8 76 1041 6 17 503 236 198 226 280 285 215 305 256 240 229 230 262 255 267 241 285 267 272 250 275 279 210 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.00 0.01 -0.02 -0.01 0.03 -0.02 0.00 -0.01 0.01 0.02 -0.01 0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 0.02 -0.01 -0.02 0.04 -0.02 -0.00 0.02 -0.01 0.01 0.01 0.00 0.01 0.01 ]
G [ 0.01 0.01 0.00 0.01 0.01 -0.02 0.03 -0.00 -0.01 0.05 -0.01 -0.01 0.01 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.01 -0.01 0.02 0.01 -0.00 -0.00 -0.03 0.03 -0.01 -0.01 0.01 0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4346

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3171

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2143

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 947

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 793

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 633

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 537

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 433

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 23

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 22

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000691.1 CREB1 ENCSR331ORD HepG2 Homo sapiens MA0018.5
BP000693.1 CREB1 ENCSR620DUQ MCF-7 Homo sapiens MA0018.5
BP000694.1 CREB1 ENCSR897JAS MCF-7 Homo sapiens MA0018.5
Showing 3 profiles of page 2 from 2 pages