Detailed information of deep learning profile BP000691.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000691.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR331ORD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 0.03 -0.00 0.00 0.00 0.00 0.05 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.06 -0.00 0.00 0.04 -0.00 0.01 0.00 -0.00 0.01 ]
G [ 0.00 0.00 -0.00 0.01 0.00 -0.00 0.07 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 0.02 0.01 -0.00 0.00 0.00 0.05 -0.00 0.00 0.01 0.00 0.01 -0.00 ]

Frequency matrix

       
A [ 1176 1127 1055 1068 1126 1016 1009 1058 1068 1035 1053 1055 1038 975 1020 1205 766 533 3378 35 232 77 247 5073 223 1014 1223 977 929 901 984 890 925 973 1025 1011 1026 1088 1080 1131 1120 1077 1122 1139 1112 1164 1116 1091 1052 1112 ]
C [ 1580 1511 1589 1613 1616 1549 1758 1638 1696 1713 1681 1662 1732 1751 1365 1562 1116 968 180 4954 40 124 4962 43 2600 1804 1036 2137 2045 1499 1603 1509 1880 1570 1822 1853 1608 1645 1664 1546 1622 1622 1499 1538 1576 1496 1620 1546 1510 1607 ]
G [ 1500 1573 1596 1621 1635 1656 1559 1642 1526 1562 1558 1546 1586 1508 1681 1867 782 2107 1501 84 5091 40 109 233 728 786 1646 1440 1387 1718 1809 1937 1473 1899 1515 1533 1694 1554 1515 1586 1513 1558 1581 1528 1588 1618 1533 1567 1665 1547 ]
T [ 1116 1161 1132 1070 995 1151 1046 1034 1082 1062 1080 1109 1016 1138 1306 738 2708 1764 313 299 9 5131 54 23 1821 1768 1467 818 1011 1254 976 1036 1094 930 1010 975 1044 1085 1113 1109 1117 1115 1170 1167 1096 1094 1103 1168 1145 1106 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.00 0.01 -0.00 -0.01 0.04 -0.02 0.00 0.01 0.02 0.05 -0.01 0.01 0.01 0.00 -0.00 ]
C [ 0.01 0.01 0.00 0.00 0.01 -0.01 -0.02 0.07 -0.02 0.01 0.04 -0.02 0.02 0.00 0.00 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 -0.01 0.02 0.02 -0.02 0.07 -0.02 -0.02 0.02 -0.00 0.00 0.01 0.01 0.00 ]
T [ -0.00 0.00 0.01 -0.00 0.03 0.02 0.00 0.00 -0.03 0.06 -0.01 -0.02 0.02 0.01 0.01 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2043

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1196

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1084

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1052

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1014

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 904

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 676

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 576

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 422

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 193

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 192

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 175

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 168

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 91

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 33

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 25

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 25

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000692.1 CREB1 ENCSR471WXT K562 Homo sapiens MA0018.5
BP000693.1 CREB1 ENCSR620DUQ MCF-7 Homo sapiens MA0018.5
BP000694.1 CREB1 ENCSR897JAS MCF-7 Homo sapiens MA0018.5
Showing 3 profiles of page 2 from 2 pages