Detailed information of deep learning profile BP000690.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in GM23338 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000690.1
Cell line/tissue: GM23338
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR214ZAV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.03 -0.00 0.00 0.00 0.00 0.03 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.03 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.03 0.00 -0.00 0.05 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.03 0.00 0.00 0.00 0.00 0.03 -0.00 -0.00 0.01 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 298 327 313 366 331 282 276 290 254 313 325 287 303 307 285 228 282 533 9 29 1319 23 0 12 97 1322 48 326 444 281 277 288 306 263 287 336 325 313 298 306 295 353 305 289 317 328 278 344 302 302 ]
C [ 327 326 348 321 328 326 361 382 393 342 383 341 328 371 312 434 171 175 14 4 2 3 4 1 1240 2 455 502 244 386 403 321 341 359 355 350 380 342 338 337 358 331 372 365 317 319 377 340 360 339 ]
G [ 355 374 395 362 345 419 373 362 360 383 380 403 379 387 419 264 497 612 19 1292 9 266 1344 0 6 15 206 213 433 395 310 347 394 430 428 416 373 373 400 371 389 362 357 362 414 382 393 366 376 376 ]
T [ 368 321 292 299 344 321 338 314 341 310 260 317 338 283 332 422 398 28 1306 23 18 1056 0 1335 5 9 639 307 227 286 358 392 307 296 278 246 270 320 312 334 306 302 314 332 300 319 300 298 310 331 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.00 0.01 -0.02 -0.01 0.03 -0.04 -0.00 -0.00 0.01 0.03 -0.01 0.00 0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 0.01 -0.01 -0.01 0.06 -0.01 -0.00 0.03 -0.02 0.01 0.01 0.00 0.01 0.00 ]
G [ 0.00 0.01 0.00 0.01 0.02 -0.01 0.03 -0.00 -0.02 0.05 -0.02 -0.01 0.01 0.00 -0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.01 0.00 -0.01 0.03 0.00 -0.01 0.00 -0.03 0.03 -0.01 -0.02 0.01 0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 6155

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 954

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 747

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 701

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 503

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 500

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 331

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 323

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 255

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 205

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 105

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 101

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 82

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000691.1 CREB1 ENCSR331ORD HepG2 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages