Detailed information of deep learning profile BP000690.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in GM23338 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000690.1
Cell line/tissue: GM23338
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR214ZAV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.01 -0.00 -0.00 0.03 0.00 0.00 0.00 0.00 0.03 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.05 -0.00 0.00 0.03 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.03 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.03 0.00 0.00 0.00 -0.00 0.03 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 331 310 298 300 319 300 332 314 302 306 334 312 320 270 246 278 296 307 392 358 286 227 307 639 9 5 1335 0 1056 18 23 1306 28 398 422 332 283 338 317 260 310 341 314 338 321 344 299 292 321 368 ]
C [ 376 376 366 393 382 414 362 357 362 389 371 400 373 373 416 428 430 394 347 310 395 433 213 206 15 6 0 1344 266 9 1292 19 612 497 264 419 387 379 403 380 383 360 362 373 419 345 362 395 374 355 ]
G [ 339 360 340 377 319 317 365 372 331 358 337 338 342 380 350 355 359 341 321 403 386 244 502 455 2 1240 1 4 3 2 4 14 175 171 434 312 371 328 341 383 342 393 382 361 326 328 321 348 326 327 ]
T [ 302 302 344 278 328 317 289 305 353 295 306 298 313 325 336 287 263 306 288 277 281 444 326 48 1322 97 12 0 23 1319 29 9 533 282 228 285 307 303 287 325 313 254 290 276 282 331 366 313 327 298 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 0.01 -0.02 -0.01 0.03 -0.03 0.00 -0.01 0.00 0.03 -0.01 0.00 0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 0.00 0.01 -0.01 -0.02 0.05 -0.02 -0.00 0.03 -0.01 0.02 0.01 0.00 0.01 0.00 ]
G [ 0.00 0.01 0.00 0.01 0.01 -0.02 0.03 -0.00 -0.01 0.06 -0.01 -0.01 0.01 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.01 0.00 -0.01 0.03 0.01 -0.00 -0.00 -0.04 0.03 -0.01 -0.02 0.01 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 6155

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 954

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 747

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 701

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 503

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 500

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 331

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 323

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 255

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 205

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 105

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 101

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 82

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000692.1 CREB1 ENCSR471WXT K562 Homo sapiens MA0018.5
BP000693.1 CREB1 ENCSR620DUQ MCF-7 Homo sapiens MA0018.5
BP000694.1 CREB1 ENCSR897JAS MCF-7 Homo sapiens MA0018.5
Showing 3 profiles of page 2 from 2 pages