Detailed information of deep learning profile BP000689.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000689.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR112ALD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.02 0.00 -0.00 0.07 0.00 0.01 0.00 0.00 0.06 -0.00 0.00 0.01 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.10 -0.00 0.00 0.06 0.00 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.01 0.01 -0.00 0.07 0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 0.01 0.00 -0.00 0.07 0.00 0.00 0.00 -0.00 0.06 -0.00 0.00 0.02 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 1794 1954 2092 2093 2085 2038 1972 1962 1776 1779 1886 1953 1831 2125 1894 2186 1912 1135 1397 4060 1 2 6565 0 5656 110 173 6567 106 2162 2776 1936 1796 1936 1873 1874 1949 2064 1996 2131 1981 2035 1834 1876 1932 1846 1963 1770 1956 2041 ]
C [ 1430 1364 1335 1309 1284 1414 1368 1387 1533 1535 1420 1503 1394 1306 1492 1447 1463 1783 864 243 5 15 0 6571 886 43 6346 1 2702 2129 1020 1513 1481 1381 1410 1602 1442 1390 1418 1286 1461 1437 1354 1439 1379 1438 1358 1559 1454 1305 ]
G [ 1487 1369 1406 1404 1419 1308 1290 1323 1212 1307 1301 1326 1488 1350 1396 1329 1341 911 2040 2228 1 6464 9 6 11 17 52 9 295 754 1560 1299 1312 1313 1273 1231 1286 1196 1465 1391 1248 1338 1294 1322 1287 1290 1309 1359 1336 1407 ]
T [ 1872 1896 1750 1777 1795 1823 1953 1911 2062 1962 1976 1801 1870 1802 1801 1621 1867 2754 2282 52 6576 102 9 6 30 6413 12 6 3480 1538 1227 1835 1994 1953 2027 1876 1906 1933 1704 1775 1893 1773 2101 1946 1985 2009 1953 1895 1837 1830 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.01 -0.01 0.03 -0.06 -0.04 0.07 -0.07 0.01 -0.01 0.00 0.06 -0.04 0.00 0.01 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.01 0.02 -0.02 -0.06 0.10 -0.03 -0.02 0.06 -0.04 0.03 0.01 0.00 0.01 0.01 ]
G [ 0.01 0.01 -0.00 0.02 0.03 -0.05 0.07 -0.04 -0.02 0.11 -0.05 -0.01 0.00 -0.01 0.00 0.01 0.00 0.00 ]
T [ 0.00 -0.00 0.01 0.01 -0.04 0.07 -0.00 -0.00 0.01 -0.08 0.06 -0.04 -0.05 0.03 -0.01 -0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 13919

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3960

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2737

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 612

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 338

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 331

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 293

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 229

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 190

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 184

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 133

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 126

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 53

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 29

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
BP000691.1 CREB1 ENCSR331ORD HepG2 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages