Detailed information of deep learning profile BP000689.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000689.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR112ALD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.02 0.00 -0.00 0.06 -0.00 0.00 0.00 0.00 0.07 -0.00 0.00 0.01 -0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.07 -0.00 0.01 0.01 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.00 0.06 0.00 -0.00 0.10 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.01 0.00 -0.00 0.06 0.00 0.00 0.01 0.00 0.07 -0.00 0.00 0.02 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 1830 1837 1895 1953 2009 1985 1946 2101 1773 1893 1775 1704 1933 1906 1876 2027 1953 1994 1835 1227 1538 3480 6 12 6413 30 6 9 102 6576 52 2282 2754 1867 1621 1801 1802 1870 1801 1976 1962 2062 1911 1953 1823 1795 1777 1750 1896 1872 ]
C [ 1407 1336 1359 1309 1290 1287 1322 1294 1338 1248 1391 1465 1196 1286 1231 1273 1313 1312 1299 1560 754 295 9 52 17 11 6 9 6464 1 2228 2040 911 1341 1329 1396 1350 1488 1326 1301 1307 1212 1323 1290 1308 1419 1404 1406 1369 1487 ]
G [ 1305 1454 1559 1358 1438 1379 1439 1354 1437 1461 1286 1418 1390 1442 1602 1410 1381 1481 1513 1020 2129 2702 1 6346 43 886 6571 0 15 5 243 864 1783 1463 1447 1492 1306 1394 1503 1420 1535 1533 1387 1368 1414 1284 1309 1335 1364 1430 ]
T [ 2041 1956 1770 1963 1846 1932 1876 1834 2035 1981 2131 1996 2064 1949 1874 1873 1936 1796 1936 2776 2162 106 6567 173 110 5656 0 6565 2 1 4060 1397 1135 1912 2186 1894 2125 1831 1953 1886 1779 1776 1962 1972 2038 2085 2093 2092 1954 1794 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.01 -0.01 0.03 -0.05 -0.04 0.06 -0.08 0.01 -0.00 -0.00 0.07 -0.04 0.01 0.01 -0.00 0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.01 0.00 -0.01 -0.05 0.11 -0.02 -0.04 0.07 -0.05 0.03 0.02 -0.00 0.01 0.01 ]
G [ 0.01 0.01 0.00 0.01 0.03 -0.04 0.06 -0.02 -0.03 0.10 -0.06 -0.02 0.02 -0.01 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.01 0.00 -0.04 0.06 0.00 -0.01 0.01 -0.07 0.07 -0.04 -0.06 0.03 -0.01 -0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 13919

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3960

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2737

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 612

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 338

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 331

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 293

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 229

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 190

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 184

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 133

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 126

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 53

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 29

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000692.1 CREB1 ENCSR471WXT K562 Homo sapiens MA0018.5
BP000693.1 CREB1 ENCSR620DUQ MCF-7 Homo sapiens MA0018.5
BP000694.1 CREB1 ENCSR897JAS MCF-7 Homo sapiens MA0018.5
Showing 3 profiles of page 2 from 2 pages