Detailed information of deep learning profile BP000688.1

  1. Home
  2. Deep Learning Profile > BP000688.1
This page shows detailed deep learning-derived predictions and motifs for CREB1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000688.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR000BVL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.00 0.00 0.02 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.02 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.02 0.00 -0.00 0.03 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.02 0.00 0.00 -0.00 0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 476 504 520 469 508 513 483 490 532 512 503 489 448 494 517 474 492 522 525 474 399 474 832 30 34 2015 110 5 72 523 2030 172 573 623 405 440 489 506 467 475 503 503 465 510 497 505 502 525 497 481 ]
C [ 539 493 494 507 499 521 514 550 491 508 470 528 570 562 491 592 590 521 544 504 717 325 351 49 20 2 7 1 230 1512 5 736 701 398 521 553 512 518 536 562 536 519 540 538 535 509 505 498 524 527 ]
G [ 572 539 559 574 557 553 546 566 547 538 613 571 487 534 581 562 569 561 593 604 434 656 796 17 1841 27 440 2080 1 25 33 343 343 717 613 556 557 600 587 549 579 559 587 539 562 550 571 557 541 567 ]
T [ 499 550 513 536 522 499 543 480 516 528 500 498 581 496 497 458 435 482 424 504 536 631 107 1990 191 42 1529 0 1783 26 18 835 469 348 547 537 528 462 496 500 468 505 494 499 492 522 508 506 524 511 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.00 0.01 -0.01 -0.01 0.02 -0.02 -0.00 -0.00 0.01 0.02 -0.01 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 0.00 0.01 -0.01 -0.01 0.04 -0.01 0.00 0.02 -0.01 0.01 0.01 0.00 0.01 0.00 ]
G [ 0.00 0.01 0.00 0.00 0.01 -0.01 0.02 0.00 -0.01 0.03 -0.02 -0.01 0.01 -0.00 -0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.01 0.02 0.01 -0.01 -0.00 -0.02 0.02 -0.01 -0.02 0.01 -0.00 -0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 8958

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2425

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2024

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1313

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1295

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 528

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 441

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 333

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 276

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 248

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 214

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 198

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 121

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 90

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 53

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000692.1 CREB1 ENCSR471WXT K562 Homo sapiens MA0018.5
BP000693.1 CREB1 ENCSR620DUQ MCF-7 Homo sapiens MA0018.5
BP000694.1 CREB1 ENCSR897JAS MCF-7 Homo sapiens MA0018.5
Showing 3 profiles of page 2 from 2 pages