JASPAR - CREB1 - BP000687.1

This page shows detailed deep learning-derived predictions and motifs for CREB1 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	CREB1
Model ID:	BP000687.1
Cell line/tissue:	Ishikawa
Class:	Basic leucine zipper factors (bZIP)
Family:	CREB-related factors
JASPAR ID:	MA0018.5
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P16220
Source:	ENCSR000BUR
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 4612

Contribution weight matrix (CWM)

A [	-0.00	0.00	0.01	-0.00	-0.00	0.06	-0.00	-0.00	-0.00	0.01	0.02	-0.00	0.00	]
C [	0.00	0.00	-0.00	0.00	-0.00	0.00	0.07	-0.00	0.00	0.01	-0.00	0.00	0.00	]
G [	0.00	-0.00	0.01	-0.00	0.04	0.00	-0.00	0.06	-0.00	-0.00	0.00	-0.00	-0.00	]
T [	-0.00	0.00	-0.00	0.05	0.00	-0.00	-0.00	-0.00	0.03	-0.00	0.00	0.00	0.00	]

Frequency matrix

A [	871	839	889	878	880	799	834	898	867	887	858	847	850	819	786	790	753	724	791	847	719	921	777	683	1055	1336	1384	14	29	4466	3	292	274	1415	2290	714	1040	930	769	829	841	834	838	790	834	896	766	859	891	902	]
C [	1491	1440	1462	1458	1456	1473	1479	1428	1461	1426	1369	1396	1393	1422	1573	1422	1389	1684	1386	1705	1590	1612	1257	1326	1561	799	742	67	54	30	4469	102	1513	1903	662	1481	1477	1327	1420	1385	1409	1424	1308	1489	1378	1452	1515	1486	1376	1405	]
G [	1392	1457	1375	1417	1466	1431	1433	1377	1420	1439	1523	1459	1546	1539	1458	1657	1632	1467	1726	1433	1510	1294	1872	1794	966	1585	2328	13	4308	71	39	4151	190	839	1045	1434	1242	1656	1607	1566	1593	1546	1649	1517	1630	1434	1503	1466	1491	1408	]
T [	858	876	886	859	810	909	866	909	864	860	862	910	823	832	795	743	838	737	709	627	793	785	706	809	1030	892	158	4518	221	45	101	67	2635	455	615	983	853	699	816	832	769	808	817	816	770	830	828	801	854	897	]

Hypothetical CWM

A [	0.00	-0.00	0.00	0.01	0.02	-0.03	-0.01	0.06	-0.04	-0.00	-0.01	0.02	0.03	-0.00	0.01	0.00	-0.00	]
C [	0.00	0.01	0.01	-0.00	-0.01	0.02	-0.03	-0.03	0.07	-0.04	0.01	0.02	-0.02	0.01	0.00	0.01	0.01	]
G [	0.01	0.01	0.00	0.00	0.01	-0.04	0.04	-0.00	-0.03	0.07	-0.03	-0.01	0.01	-0.00	-0.00	0.01	0.01	]
T [	-0.00	0.00	0.01	0.01	-0.01	0.05	0.02	-0.01	-0.00	-0.04	0.04	-0.01	-0.01	0.01	0.00	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 335

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 167

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 131

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 97

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 46

CWM

PFM

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000692.1	CREB1	ENCSR471WXT	K562	Homo sapiens	MA0018.5
BP000693.1	CREB1	ENCSR620DUQ	MCF-7	Homo sapiens	MA0018.5
BP000694.1	CREB1	ENCSR897JAS	MCF-7	Homo sapiens	MA0018.5