Detailed information of deep learning profile BP000685.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000685.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR000BSO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.03 -0.00 0.00 0.00 0.00 0.03 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.03 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.02 -0.00 -0.00 0.04 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.03 0.00 -0.00 0.00 0.00 0.03 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 330 315 312 316 341 327 310 349 310 325 269 302 297 304 357 295 315 349 297 256 300 616 11 13 1303 68 6 31 119 1298 36 409 393 270 272 294 327 270 311 336 310 317 361 308 311 322 311 294 307 321 ]
C [ 334 332 299 306 310 302 321 307 335 294 362 310 353 349 359 357 340 341 292 410 199 192 20 10 10 5 6 9 1188 5 489 375 230 397 384 344 319 318 322 332 329 336 337 332 315 336 353 325 310 358 ]
G [ 315 339 392 364 361 371 399 361 352 365 374 373 366 370 347 392 354 380 423 270 424 471 8 1255 6 328 1320 3 18 24 200 233 486 367 348 367 383 404 409 380 383 371 313 348 380 369 351 374 362 330 ]
T [ 353 346 329 346 320 332 302 315 335 348 327 347 316 309 269 288 323 262 320 396 409 53 1293 54 13 931 0 1289 7 5 607 315 223 298 328 327 303 340 290 284 310 308 321 344 326 305 317 339 353 323 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.00 0.01 -0.02 -0.01 0.03 -0.03 0.00 -0.00 0.01 0.03 -0.01 0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 0.01 -0.01 -0.01 0.05 -0.01 -0.00 0.03 -0.02 0.01 0.01 0.00 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.01 -0.02 0.03 0.00 -0.01 0.04 -0.02 -0.01 0.02 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.00 -0.01 0.03 0.01 -0.01 0.00 -0.03 0.03 -0.01 -0.02 0.01 -0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 6734

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3572

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 905

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 767

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 642

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 592

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 237

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 151

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 116

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
BP000691.1 CREB1 ENCSR331ORD HepG2 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages