Detailed information of deep learning profile BP000684.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000684.1
Cell line/tissue: H1
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR000BSN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.04 -0.00 -0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.04 -0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 -0.00 0.04 0.00 -0.00 0.06 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.03 0.00 0.00 -0.00 0.00 0.04 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 287 321 327 284 312 321 290 282 257 254 277 314 260 293 293 247 245 304 582 1 7 1318 56 1 45 93 1309 57 376 375 279 264 294 270 253 281 324 322 286 289 301 304 335 307 291 299 300 285 310 284 ]
C [ 369 331 330 359 356 341 339 356 367 405 414 431 386 361 358 319 439 207 172 21 3 10 2 4 14 1244 6 486 441 290 402 458 350 363 385 353 380 377 371 372 378 361 329 354 360 336 361 379 350 373 ]
G [ 400 396 400 407 401 379 435 407 399 388 409 371 421 382 428 488 278 508 564 6 1318 9 338 1352 4 11 34 234 227 480 403 328 369 447 446 433 410 370 399 381 359 422 405 407 404 416 378 393 396 406 ]
T [ 301 309 300 307 288 316 293 312 334 310 257 241 290 321 278 303 395 338 39 1329 29 20 961 0 1294 9 8 580 313 212 273 307 344 277 273 290 243 288 301 315 319 270 288 289 302 306 318 300 301 294 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.01 0.00 0.02 -0.02 -0.02 0.04 -0.04 -0.00 -0.01 0.01 0.03 -0.01 0.00 0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 0.02 -0.02 -0.01 0.08 -0.01 -0.00 0.04 -0.02 0.02 0.01 0.00 0.01 0.01 ]
G [ 0.01 0.01 0.00 0.01 0.02 -0.02 0.04 -0.00 -0.02 0.06 -0.02 -0.02 0.03 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.00 -0.02 0.03 0.01 -0.01 -0.00 -0.04 0.04 -0.02 -0.02 0.02 0.00 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7235

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2388

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1075

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 882

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 801

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 690

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 282

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 261

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 152

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 114

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000692.1 CREB1 ENCSR471WXT K562 Homo sapiens MA0018.5
BP000693.1 CREB1 ENCSR620DUQ MCF-7 Homo sapiens MA0018.5
BP000694.1 CREB1 ENCSR897JAS MCF-7 Homo sapiens MA0018.5
Showing 3 profiles of page 2 from 2 pages