JASPAR - CREB1 - BP000681.1

This page shows detailed deep learning-derived predictions and motifs for CREB1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	CREB1
Model ID:	BP000681.1
Cell line/tissue:	A549
Class:	Basic leucine zipper factors (bZIP)
Family:	CREB-related factors
JASPAR ID:	MA0018.5
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P16220
Source:	ENCSR000BRA
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 2711

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	-0.00	0.03	-0.00	-0.00	-0.00	0.00	0.04	-0.00	-0.00	-0.00	]
C [	-0.00	-0.00	-0.00	-0.00	-0.00	0.08	-0.00	0.00	0.03	-0.00	0.01	0.00	0.00	]
G [	0.00	0.00	-0.00	0.01	0.01	-0.00	0.08	-0.00	-0.00	0.00	-0.00	0.00	0.00	]
T [	0.00	-0.00	0.02	0.01	-0.00	-0.00	0.00	0.05	-0.00	-0.00	0.01	0.00	-0.00	]

Frequency matrix

A [	519	464	459	484	492	439	456	447	471	446	450	454	382	524	543	384	239	1493	14	19	44	189	2586	174	482	674	476	388	458	473	346	369	368	470	420	437	485	508	483	481	503	503	537	471	510	455	449	514	484	511	]
C [	808	893	874	866	846	995	886	982	918	947	915	957	1078	731	897	560	362	81	2633	3	99	2448	11	1277	960	552	1083	1120	718	908	776	1166	802	1007	1096	823	882	889	834	874	890	834	838	847	855	906	861	808	892	841	]
G [	878	865	880	953	863	837	916	851	881	807	892	868	735	862	821	423	1167	1006	4	2689	20	42	103	455	485	884	776	754	1042	946	1181	747	1146	792	783	974	863	804	866	837	829	860	794	871	909	851	893	879	837	864	]
T [	506	489	498	408	510	440	453	431	441	511	454	432	516	594	450	1344	943	131	60	0	2548	32	11	805	784	601	376	449	493	384	408	429	395	442	412	477	481	510	528	519	489	514	542	522	437	499	508	510	498	495	]

Hypothetical CWM

A [	-0.00	0.00	0.01	-0.01	-0.02	0.04	-0.04	-0.01	-0.02	0.02	0.04	-0.01	-0.00	0.00	-0.00	]
C [	0.00	-0.00	-0.00	0.00	-0.02	-0.03	0.08	-0.05	0.00	0.03	-0.03	0.01	0.00	-0.00	0.01	]
G [	0.00	0.00	0.01	-0.01	0.02	0.02	-0.05	0.08	-0.03	-0.03	0.02	-0.01	-0.00	0.01	0.00	]
T [	-0.00	0.00	-0.01	0.02	0.02	-0.02	-0.01	-0.04	0.05	-0.02	-0.03	0.02	0.01	-0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 146

CWM

PFM

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000692.1	CREB1	ENCSR471WXT	K562	Homo sapiens	MA0018.5
BP000693.1	CREB1	ENCSR620DUQ	MCF-7	Homo sapiens	MA0018.5
BP000694.1	CREB1	ENCSR897JAS	MCF-7	Homo sapiens	MA0018.5