Detailed information of deep learning profile BP000634.1

This page shows detailed deep learning-derived predictions and motifs for USF1 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF1
Model ID: BP000634.1
Cell line/tissue: H1
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0093.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P22415  
Source: ENCSR000BIU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.11 0.00 0.01 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.18 -0.00 0.13 0.00 -0.00 0.00 -0.00 0.04 0.01 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.05 -0.00 0.00 0.00 0.00 0.03 -0.00 0.18 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.05 -0.00 -0.00 0.00 -0.00 0.10 -0.00 -0.00 0.01 -0.00 -0.00 ]

Frequency matrix

A [ 5232 5713 6944 6277 5218 5282 5449 5122 5114 6103 6560 6842 6742 5494 5522 7016 7196 6270 937 5 24526 8 13715 488 2 11207 1351 3848 7116 6110 6682 5202 5088 5329 6464 6723 6237 5351 5924 7271 7735 6424 6162 6372 6342 6257 6074 5778 6080 6055 ]
C [ 6630 6647 6214 5779 5611 5480 5400 6702 7543 6840 6395 5793 6538 6861 6648 4662 3370 1770 3975 24744 111 23477 4065 256 2 3373 13096 10682 6990 6989 6133 7203 7915 6490 5691 5661 6677 7365 7130 6559 5578 5801 6429 5931 5751 5813 5911 6108 6360 5929 ]
G [ 6062 6545 6113 5958 6071 7721 8879 7454 5799 6102 6835 7286 6385 6680 6515 7115 10382 15993 2266 4 54 1035 6949 262 24727 7753 3598 4771 5169 6193 6526 6572 5728 6235 7110 7388 6595 6185 6205 5796 6186 6708 6889 7289 7299 7004 7278 6937 6770 6968 ]
T [ 6834 5853 5487 6744 7858 6275 5030 5480 6302 5713 4968 4837 5093 5723 6073 5965 3810 725 17580 5 67 238 29 23752 27 2425 6713 5457 5483 5466 5417 5781 6027 6704 5493 4986 5249 5857 5499 5132 5259 5825 5278 5166 5366 5684 5495 5935 5548 5806 ]

Hypothetical CWM

A [ 0.00 -0.00 0.00 -0.00 0.04 -0.03 -0.03 0.11 -0.11 0.03 -0.04 -0.07 0.05 -0.04 -0.01 -0.00 -0.00 0.00 ]
C [ 0.02 0.02 0.02 0.02 -0.00 0.03 0.18 -0.02 0.13 0.01 0.00 -0.07 0.01 0.07 0.04 0.03 0.02 0.02 ]
G [ 0.02 0.02 0.03 0.04 0.08 0.00 -0.06 -0.00 0.02 0.14 -0.03 0.18 0.03 0.01 0.03 0.02 0.02 0.02 ]
T [ 0.00 -0.00 0.00 -0.01 -0.05 0.06 -0.07 -0.05 0.03 -0.12 0.11 -0.02 -0.02 0.03 -0.01 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1232

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 417

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 193

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 190

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 75

13 profiles found for the same TF (USF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000642.1 USF1 ENCSR099FCQ HepG2 Homo sapiens MA0093.4
BP000643.1 USF1 ENCSR248QBT WTC11 Homo sapiens MA0093.4
BP000644.1 USF1 ENCSR787CHF K562 Homo sapiens MA0093.4
Showing 3 profiles of page 2 from 2 pages