This page shows detailed deep learning-derived predictions and motifs for USF1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | USF1 |
| Model ID: | BP000631.1 |
| Cell line/tissue: | GM12878 |
| Class: | Basic helix-loop-helix factors (bHLH) |
| Family: | bHLH-ZIP |
| JASPAR ID: | MA0093.4 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P22415 |
| Source: | ENCSR000BGI |
| Model: | BPNet |
| Download trained model | |
| Download TF-MoDISco Report |
| A [ | -0.00 | -0.00 | 0.00 | -0.00 | -0.00 | 0.09 | -0.00 | 0.00 | -0.00 | -0.00 | 0.04 | -0.00 | -0.00 | -0.00 | -0.00 | -0.00 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 0.00 | 0.00 | 0.00 | 0.01 | 0.14 | -0.00 | 0.09 | 0.00 | 0.00 | 0.00 | -0.00 | 0.04 | 0.01 | 0.00 | 0.00 | 0.00 | ] |
| G [ | 0.00 | 0.01 | 0.02 | -0.00 | 0.00 | 0.00 | 0.00 | 0.11 | -0.00 | 0.14 | 0.00 | -0.00 | 0.00 | 0.00 | 0.01 | 0.00 | ] |
| T [ | -0.00 | -0.00 | -0.00 | 0.01 | -0.00 | -0.00 | 0.00 | -0.00 | 0.11 | -0.00 | -0.00 | 0.00 | -0.00 | -0.00 | -0.00 | -0.00 | ] |
| A [ | 1551 | 1784 | 1534 | 1549 | 1664 | 1750 | 1533 | 1476 | 1558 | 2001 | 1806 | 1634 | 1555 | 1774 | 1458 | 1447 | 1898 | 966 | 15 | 7945 | 9 | 392 | 4 | 2 | 6081 | 148 | 1104 | 1596 | 1979 | 1772 | 1480 | 1398 | 1403 | 1628 | 1758 | 1446 | 1388 | 1884 | 2438 | 2094 | 1542 | 1682 | 1998 | 1799 | 1891 | 1655 | 1611 | 1653 | 1801 | 1701 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 2660 | 2428 | 2438 | 2366 | 2433 | 2400 | 2590 | 2764 | 2786 | 2581 | 2280 | 2605 | 2657 | 2326 | 2254 | 2060 | 2097 | 3969 | 8402 | 130 | 5988 | 335 | 10 | 16 | 816 | 5828 | 3629 | 2840 | 2349 | 2408 | 2360 | 2879 | 2661 | 2239 | 2349 | 2888 | 3374 | 2957 | 2359 | 2241 | 2335 | 2583 | 2315 | 2363 | 2373 | 2375 | 2390 | 2525 | 2391 | 2421 | ] |
| G [ | 2518 | 2355 | 2326 | 2561 | 2679 | 2844 | 2592 | 2243 | 2186 | 2381 | 2829 | 2752 | 2452 | 2814 | 2538 | 3921 | 3635 | 1627 | 14 | 198 | 400 | 7702 | 12 | 8412 | 1170 | 802 | 1386 | 1996 | 2649 | 2779 | 2667 | 2329 | 2390 | 2841 | 2932 | 2645 | 2097 | 2082 | 2156 | 2229 | 2425 | 2601 | 2629 | 2586 | 2356 | 2648 | 2523 | 2496 | 2476 | 2613 | ] |
| T [ | 1704 | 1866 | 2135 | 1957 | 1657 | 1439 | 1718 | 1950 | 1903 | 1470 | 1518 | 1442 | 1769 | 1519 | 2183 | 1005 | 803 | 1871 | 2 | 160 | 2036 | 4 | 8407 | 3 | 366 | 1655 | 2314 | 2001 | 1456 | 1474 | 1926 | 1827 | 1979 | 1725 | 1394 | 1454 | 1574 | 1510 | 1480 | 1869 | 2131 | 1567 | 1491 | 1685 | 1813 | 1755 | 1909 | 1759 | 1765 | 1698 | ] |
| A [ | -0.00 | -0.00 | -0.00 | -0.01 | 0.02 | -0.02 | -0.04 | 0.10 | -0.11 | 0.02 | -0.04 | -0.07 | 0.05 | -0.04 | -0.01 | 0.00 | -0.00 | 0.00 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 0.01 | 0.02 | 0.02 | 0.03 | 0.01 | 0.02 | 0.14 | -0.04 | 0.12 | -0.02 | 0.00 | -0.05 | 0.01 | 0.06 | 0.02 | 0.02 | 0.01 | 0.01 | ] |
| G [ | 0.01 | 0.01 | 0.02 | 0.03 | 0.05 | 0.01 | -0.06 | 0.01 | -0.03 | 0.12 | -0.04 | 0.14 | 0.02 | -0.01 | 0.03 | 0.01 | 0.02 | 0.01 | ] |
| T [ | 0.00 | -0.00 | -0.00 | -0.01 | -0.03 | 0.04 | -0.07 | -0.03 | 0.03 | -0.11 | 0.11 | -0.04 | -0.03 | 0.02 | -0.00 | 0.00 | -0.00 | -0.00 | ] |
