Detailed information of deep learning profile BP000630.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000630.1
Cell line/tissue: HepG2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR784BVD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.03 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.04 0.00 0.05 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.05 -0.00 0.04 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1424 1395 1484 1386 1303 1448 1402 1375 1322 1335 1294 1367 1376 1320 1359 1383 1300 1646 2152 1262 42 7510 0 1 852 3 568 993 1249 1260 1215 1305 1418 1268 1241 1333 1325 1408 1314 1354 1320 1417 1382 1299 1391 1367 1329 1372 1366 1270 ]
C [ 2411 2368 2406 2430 2480 2508 2375 2441 2554 2503 2547 2542 2475 2634 2599 2340 2521 1884 2142 2546 7635 0 7672 0 1956 17 802 3794 2657 2476 2518 2507 2321 2651 2433 2417 2479 2429 2531 2597 2525 2431 2428 2487 2483 2357 2492 2458 2405 2503 ]
G [ 2416 2603 2463 2471 2537 2446 2576 2635 2404 2454 2501 2452 2517 2426 2391 2845 2615 3158 2224 3055 1 53 0 7677 7 7307 5527 1420 2149 2607 2517 2690 2647 2542 2702 2606 2528 2628 2510 2438 2434 2541 2456 2465 2391 2494 2476 2466 2465 2512 ]
T [ 1427 1312 1325 1391 1358 1276 1325 1227 1398 1386 1336 1317 1310 1298 1329 1110 1242 990 1160 815 0 115 6 0 4863 351 781 1471 1623 1335 1428 1176 1292 1217 1302 1322 1346 1213 1323 1289 1399 1289 1412 1427 1413 1460 1381 1382 1442 1393 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.00 0.00 -0.00 -0.00 0.03 -0.04 0.01 -0.01 -0.03 -0.01 -0.01 -0.01 -0.01 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.01 0.04 -0.03 0.05 -0.03 0.02 -0.01 0.01 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.01 -0.02 0.02 -0.03 0.05 -0.03 0.04 0.01 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.01 -0.01 -0.01 -0.01 -0.03 -0.01 0.01 -0.04 0.02 -0.00 -0.00 0.00 -0.00 -0.00 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4044

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3152

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2348

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1166

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 680

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 421

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 120

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 106

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 95

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000608.1 MYC ENCSR000DKU GM12878 Homo sapiens MA0147.4
BP000609.1 MYC ENCSR000DLN HeLa-S3 Homo sapiens MA0147.4
BP000610.1 MYC ENCSR000DLR HepG2 Homo sapiens MA0147.4
BP000611.1 MYC ENCSR000DLU endothelial cell of umbilical vein Homo sapiens MA0147.4
BP000612.1 MYC ENCSR000DLZ K562 Homo sapiens MA0147.4
BP000613.1 MYC ENCSR000DMJ MCF-7 Homo sapiens MA0147.4
BP000614.1 MYC ENCSR000DMM MCF-7 Homo sapiens MA0147.4
BP000615.1 MYC ENCSR000DMP MCF-7 Homo sapiens MA0147.4
BP000616.1 MYC ENCSR000DMQ MCF-7 Homo sapiens MA0147.4
BP000617.1 MYC ENCSR000DOM MCF 10A Homo sapiens MA0147.4
Showing 10 profiles of page 1 from 3 pages