Detailed information of deep learning profile BP000629.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000629.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR744JJU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.01 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.02 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.02 0.00 0.02 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.01 -0.00 -0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 368 349 392 361 402 376 380 385 339 418 333 355 327 371 343 379 346 339 341 394 343 449 435 206 50 1773 0 4 78 0 217 369 316 389 284 339 381 389 412 382 378 390 349 390 337 408 380 371 370 403 ]
C [ 644 673 651 628 609 579 630 599 654 576 629 615 643 640 705 688 609 716 639 626 694 506 381 1489 1930 3 1979 0 5 0 798 435 776 656 694 618 600 637 613 586 625 612 654 580 625 607 620 605 662 632 ]
G [ 621 581 590 598 565 601 565 579 619 601 647 648 612 574 543 569 635 553 627 641 537 685 911 182 2 6 1 1978 1 1954 544 612 455 589 613 586 636 648 607 642 591 625 628 613 597 614 598 604 571 572 ]
T [ 349 379 349 395 406 426 407 419 370 387 373 364 400 397 391 346 392 374 375 321 408 342 255 105 0 200 2 0 1898 28 423 566 435 348 391 439 365 308 350 372 388 355 351 399 423 353 384 402 379 375 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.01 -0.02 0.00 -0.00 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.01 0.02 -0.02 0.02 -0.02 0.01 -0.01 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 -0.01 0.01 -0.02 0.02 -0.02 0.02 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.00 0.00 -0.02 0.01 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1393

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 549

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 497

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 186

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 57

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 37

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000608.1 MYC ENCSR000DKU GM12878 Homo sapiens MA0147.4
BP000609.1 MYC ENCSR000DLN HeLa-S3 Homo sapiens MA0147.4
BP000610.1 MYC ENCSR000DLR HepG2 Homo sapiens MA0147.4
BP000611.1 MYC ENCSR000DLU endothelial cell of umbilical vein Homo sapiens MA0147.4
BP000612.1 MYC ENCSR000DLZ K562 Homo sapiens MA0147.4
BP000613.1 MYC ENCSR000DMJ MCF-7 Homo sapiens MA0147.4
BP000614.1 MYC ENCSR000DMM MCF-7 Homo sapiens MA0147.4
BP000615.1 MYC ENCSR000DMP MCF-7 Homo sapiens MA0147.4
BP000616.1 MYC ENCSR000DMQ MCF-7 Homo sapiens MA0147.4
BP000617.1 MYC ENCSR000DOM MCF 10A Homo sapiens MA0147.4
Showing 10 profiles of page 1 from 3 pages