Detailed information of deep learning profile BP000629.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000629.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR744JJU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 -0.00 -0.00 0.01 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.02 0.00 0.02 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.02 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 375 379 402 384 353 423 399 351 355 388 372 350 308 365 439 391 348 435 566 423 28 1898 0 2 200 0 105 255 342 408 321 375 374 392 346 391 397 400 364 373 387 370 419 407 426 406 395 349 379 349 ]
C [ 572 571 604 598 614 597 613 628 625 591 642 607 648 636 586 613 589 455 612 544 1954 1 1978 1 6 2 182 911 685 537 641 627 553 635 569 543 574 612 648 647 601 619 579 565 601 565 598 590 581 621 ]
G [ 632 662 605 620 607 625 580 654 612 625 586 613 637 600 618 694 656 776 435 798 0 5 0 1979 3 1930 1489 381 506 694 626 639 716 609 688 705 640 643 615 629 576 654 599 630 579 609 628 651 673 644 ]
T [ 403 370 371 380 408 337 390 349 390 378 382 412 389 381 339 284 389 316 369 217 0 78 4 0 1773 50 206 435 449 343 394 341 339 346 379 343 371 327 355 333 418 339 385 380 376 402 361 392 349 368 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.01 -0.02 0.00 -0.00 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.02 -0.02 0.02 -0.02 0.01 -0.01 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 -0.01 0.01 -0.02 0.02 -0.02 0.02 0.01 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.00 0.00 -0.02 0.01 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1393

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 549

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 497

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 186

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 57

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 37

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000628.1 MYC ENCSR000FAZ K562 Homo sapiens MA0147.4
BP000630.1 MYC ENCSR784BVD HepG2 Homo sapiens MA0147.4
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