Detailed information of deep learning profile BP000627.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000627.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000FAG
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.04 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.06 0.00 0.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.08 0.00 0.07 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.05 0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 305 327 345 274 330 319 277 321 299 271 297 312 341 317 287 315 286 320 284 371 331 203 53 1452 0 2 3 0 199 243 205 311 254 270 327 351 336 306 314 307 292 315 313 329 329 309 313 313 331 284 ]
C [ 544 501 503 530 523 511 503 522 515 514 565 530 556 546 506 539 560 541 601 412 347 1176 1566 0 1622 0 0 3 600 425 641 576 535 481 532 519 481 499 524 484 531 512 510 519 515 492 513 494 488 528 ]
G [ 485 461 461 512 474 473 529 501 518 536 470 463 448 474 514 468 486 534 436 570 700 140 4 0 0 1621 0 1617 512 428 372 436 550 531 510 455 471 547 461 510 513 498 489 498 454 500 495 495 496 488 ]
T [ 289 334 314 307 296 320 314 279 291 302 291 318 278 286 316 301 291 228 302 270 245 104 0 171 1 0 1620 3 312 527 405 300 284 341 254 298 335 271 324 322 287 298 311 277 325 322 302 321 308 323 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.01 -0.00 -0.01 0.05 -0.06 0.03 -0.01 -0.04 -0.02 -0.01 -0.01 -0.00 ]
C [ 0.01 0.01 -0.00 0.02 0.06 -0.07 0.08 -0.07 0.04 -0.04 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.02 0.01 -0.04 0.03 -0.07 0.08 -0.08 0.07 0.01 0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 -0.02 -0.04 -0.01 0.02 -0.06 0.05 -0.01 0.00 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1011

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 564

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 173

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 143

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 42

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000608.1 MYC ENCSR000DKU GM12878 Homo sapiens MA0147.4
BP000609.1 MYC ENCSR000DLN HeLa-S3 Homo sapiens MA0147.4
BP000610.1 MYC ENCSR000DLR HepG2 Homo sapiens MA0147.4
BP000611.1 MYC ENCSR000DLU endothelial cell of umbilical vein Homo sapiens MA0147.4
BP000612.1 MYC ENCSR000DLZ K562 Homo sapiens MA0147.4
BP000613.1 MYC ENCSR000DMJ MCF-7 Homo sapiens MA0147.4
BP000614.1 MYC ENCSR000DMM MCF-7 Homo sapiens MA0147.4
BP000615.1 MYC ENCSR000DMP MCF-7 Homo sapiens MA0147.4
BP000616.1 MYC ENCSR000DMQ MCF-7 Homo sapiens MA0147.4
BP000617.1 MYC ENCSR000DOM MCF 10A Homo sapiens MA0147.4
Showing 10 profiles of page 1 from 3 pages