Detailed information of deep learning profile BP000627.1

  1. Home
  2. Deep Learning Profile > BP000627.1
This page shows detailed deep learning-derived predictions and motifs for MYC in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000627.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000FAG
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 0.00 0.05 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.07 0.00 0.08 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.08 0.00 0.06 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.04 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 323 308 321 302 322 325 277 311 298 287 322 324 271 335 298 254 341 284 300 405 527 312 3 1620 0 1 171 0 104 245 270 302 228 291 301 316 286 278 318 291 302 291 279 314 320 296 307 314 334 289 ]
C [ 488 496 495 495 500 454 498 489 498 513 510 461 547 471 455 510 531 550 436 372 428 512 1617 0 1621 0 0 4 140 700 570 436 534 486 468 514 474 448 463 470 536 518 501 529 473 474 512 461 461 485 ]
G [ 528 488 494 513 492 515 519 510 512 531 484 524 499 481 519 532 481 535 576 641 425 600 3 0 0 1622 0 1566 1176 347 412 601 541 560 539 506 546 556 530 565 514 515 522 503 511 523 530 503 501 544 ]
T [ 284 331 313 313 309 329 329 313 315 292 307 314 306 336 351 327 270 254 311 205 243 199 0 3 2 0 1452 53 203 331 371 284 320 286 315 287 317 341 312 297 271 299 321 277 319 330 274 345 327 305 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.01 0.00 -0.01 0.05 -0.06 0.02 -0.01 -0.04 -0.02 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.00 0.01 0.07 -0.08 0.08 -0.07 0.03 -0.04 0.01 0.02 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 -0.04 0.04 -0.07 0.08 -0.07 0.06 0.02 -0.00 0.01 0.01 ]
T [ -0.00 -0.01 -0.01 -0.02 -0.04 -0.01 0.03 -0.06 0.05 -0.01 -0.00 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1011

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 564

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 173

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 143

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 42

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000629.1 MYC ENCSR744JJU K562 Homo sapiens MA0147.4
BP000630.1 MYC ENCSR784BVD HepG2 Homo sapiens MA0147.4
Showing 2 profiles of page 3 from 3 pages