Detailed information of deep learning profile BP000626.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000626.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EZV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.04 0.00 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.00 0.05 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.03 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 870 857 842 858 770 862 844 776 833 802 778 763 822 829 763 688 747 719 879 840 943 965 560 253 2616 1 101 26 19 498 673 574 829 755 712 827 854 831 821 859 789 801 821 778 809 807 805 801 791 844 ]
C [ 1418 1358 1364 1373 1396 1343 1367 1329 1354 1421 1365 1470 1411 1458 1417 1390 1431 1467 1352 1457 1161 879 2813 4064 16 4351 2 168 13 1715 1169 1680 1428 1389 1339 1269 1373 1281 1292 1323 1319 1431 1320 1360 1355 1349 1343 1407 1344 1388 ]
G [ 1326 1343 1374 1324 1385 1329 1307 1407 1411 1372 1436 1332 1318 1319 1390 1450 1340 1404 1468 1286 1497 1830 683 42 1294 3 4269 19 4331 1424 1300 1066 1335 1425 1472 1496 1380 1413 1487 1332 1425 1350 1396 1391 1410 1374 1344 1354 1403 1325 ]
T [ 759 815 793 818 822 839 855 861 775 778 794 808 822 767 803 845 855 783 674 790 772 699 317 14 447 18 1 4160 10 736 1231 1053 781 804 850 781 766 848 773 859 840 791 836 844 799 843 881 811 835 816 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.01 0.00 -0.00 0.03 -0.05 0.02 -0.01 -0.02 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.04 -0.05 0.06 -0.05 0.02 -0.04 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.03 0.02 -0.05 0.05 -0.05 0.05 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.03 -0.01 0.02 -0.04 0.03 -0.00 0.00 0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2178

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1486

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 456

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 282

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 196

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 121

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 120

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 56

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000608.1 MYC ENCSR000DKU GM12878 Homo sapiens MA0147.4
BP000609.1 MYC ENCSR000DLN HeLa-S3 Homo sapiens MA0147.4
BP000610.1 MYC ENCSR000DLR HepG2 Homo sapiens MA0147.4
BP000611.1 MYC ENCSR000DLU endothelial cell of umbilical vein Homo sapiens MA0147.4
BP000612.1 MYC ENCSR000DLZ K562 Homo sapiens MA0147.4
BP000613.1 MYC ENCSR000DMJ MCF-7 Homo sapiens MA0147.4
BP000614.1 MYC ENCSR000DMM MCF-7 Homo sapiens MA0147.4
BP000615.1 MYC ENCSR000DMP MCF-7 Homo sapiens MA0147.4
BP000616.1 MYC ENCSR000DMQ MCF-7 Homo sapiens MA0147.4
BP000617.1 MYC ENCSR000DOM MCF 10A Homo sapiens MA0147.4
Showing 10 profiles of page 1 from 3 pages