Detailed information of deep learning profile BP000626.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000626.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EZV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.03 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.05 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.04 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 816 835 811 881 843 799 844 836 791 840 859 773 848 766 781 850 804 781 1053 1231 736 10 4160 1 18 447 14 317 699 772 790 674 783 855 845 803 767 822 808 794 778 775 861 855 839 822 818 793 815 759 ]
C [ 1325 1403 1354 1344 1374 1410 1391 1396 1350 1425 1332 1487 1413 1380 1496 1472 1425 1335 1066 1300 1424 4331 19 4269 3 1294 42 683 1830 1497 1286 1468 1404 1340 1450 1390 1319 1318 1332 1436 1372 1411 1407 1307 1329 1385 1324 1374 1343 1326 ]
G [ 1388 1344 1407 1343 1349 1355 1360 1320 1431 1319 1323 1292 1281 1373 1269 1339 1389 1428 1680 1169 1715 13 168 2 4351 16 4064 2813 879 1161 1457 1352 1467 1431 1390 1417 1458 1411 1470 1365 1421 1354 1329 1367 1343 1396 1373 1364 1358 1418 ]
T [ 844 791 801 805 807 809 778 821 801 789 859 821 831 854 827 712 755 829 574 673 498 19 26 101 1 2616 253 560 965 943 840 879 719 747 688 763 829 822 763 778 802 833 776 844 862 770 858 842 857 870 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.01 0.00 -0.00 0.03 -0.04 0.02 -0.01 -0.03 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.05 -0.05 0.05 -0.05 0.02 -0.03 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 -0.04 0.02 -0.05 0.06 -0.05 0.04 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.02 -0.01 0.02 -0.05 0.03 -0.00 0.00 0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2178

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1486

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 456

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 282

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 196

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 121

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 120

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 56

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000629.1 MYC ENCSR744JJU K562 Homo sapiens MA0147.4
BP000630.1 MYC ENCSR784BVD HepG2 Homo sapiens MA0147.4
Showing 2 profiles of page 3 from 3 pages