Detailed information of deep learning profile BP000624.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000624.1
Cell line/tissue: HeLa-S3
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EZD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 -0.00 -0.00 0.04 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.06 0.00 0.07 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.06 0.00 0.05 0.01 -0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.04 -0.00 -0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 454 406 406 419 414 414 441 402 405 398 372 412 375 384 438 355 391 364 384 412 529 627 317 4 1934 0 5 110 10 147 251 361 341 301 384 393 374 365 420 398 420 381 420 384 422 402 401 375 426 410 ]
C [ 621 592 559 568 580 600 574 595 572 588 613 592 566 627 573 645 615 671 643 552 448 435 631 2000 2 2008 1 159 20 236 800 697 589 650 563 576 604 572 535 556 550 610 588 606 593 577 584 620 570 612 ]
G [ 570 615 633 599 628 604 598 641 622 608 639 586 629 611 627 638 610 597 615 666 711 611 875 2 57 0 2003 3 1889 1383 458 480 657 640 696 633 635 712 663 657 687 621 604 609 614 617 599 594 605 590 ]
T [ 365 397 412 424 388 392 397 372 411 416 386 420 440 388 372 372 394 378 368 380 322 337 187 4 17 2 1 1738 91 244 501 472 423 419 367 408 397 361 392 399 353 398 398 411 381 414 426 421 409 398 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.01 0.00 -0.00 0.04 -0.04 0.02 -0.00 -0.03 -0.01 -0.01 0.00 0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.06 -0.06 0.07 -0.06 0.03 -0.03 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.03 0.03 -0.06 0.06 -0.06 0.05 0.01 -0.01 0.00 0.01 ]
T [ 0.00 0.00 -0.01 -0.01 -0.03 -0.01 0.03 -0.04 0.04 -0.00 -0.00 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3032

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1385

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1156

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 507

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 241

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000629.1 MYC ENCSR744JJU K562 Homo sapiens MA0147.4
BP000630.1 MYC ENCSR784BVD HepG2 Homo sapiens MA0147.4
Showing 2 profiles of page 3 from 3 pages