Detailed information of deep learning profile BP000622.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000622.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EGS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 -0.00 0.00 0.04 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.06 0.00 0.07 0.00 0.01 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.07 0.00 0.05 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1798 1878 1813 1837 1743 1780 1758 1816 1704 1771 1683 1626 1691 1816 1840 2212 2690 1484 58 8683 5 23 786 62 806 1312 1521 1706 1520 1776 1723 1734 1697 1751 1741 1842 1638 1743 1732 1860 1878 1836 1796 1782 1792 1713 1791 1679 1763 1766 ]
C [ 2974 2957 3014 2974 2974 2916 3240 3095 3225 3163 3055 3189 3380 3050 2884 2386 2549 3226 9396 46 9417 27 3841 603 1724 4273 3411 2704 3245 2964 2986 3119 2892 2966 2899 2923 3063 3065 2999 3033 2877 2927 2989 2920 2949 2965 2886 3035 2918 2941 ]
G [ 3009 2993 2932 3007 3065 3286 2795 2915 2910 2905 2993 3009 2833 3179 3045 3693 2993 3584 94 742 11 9533 35 8345 5981 2110 2703 3402 3028 3188 3199 3103 3328 3218 3178 3152 3103 3027 3033 3035 2990 2940 2970 3047 3000 3143 3058 3065 3045 3049 ]
T [ 1805 1758 1827 1768 1804 1604 1793 1760 1747 1747 1855 1762 1682 1541 1817 1295 1354 1292 38 115 153 3 4924 576 1075 1891 1951 1774 1793 1658 1678 1630 1669 1651 1768 1669 1782 1751 1822 1658 1841 1883 1831 1837 1845 1765 1851 1807 1860 1830 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.01 0.00 -0.00 0.04 -0.06 0.03 -0.01 -0.04 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.01 0.00 0.00 0.01 0.06 -0.05 0.07 -0.05 0.03 -0.03 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.01 0.01 0.01 -0.03 0.03 -0.05 0.07 -0.05 0.05 0.01 -0.00 0.00 0.01 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.04 -0.01 0.03 -0.06 0.04 -0.00 0.00 0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 8202

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 6941

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 4471

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 2620

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1678

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 155

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 30

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 26

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 22

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000608.1 MYC ENCSR000DKU GM12878 Homo sapiens MA0147.4
BP000609.1 MYC ENCSR000DLN HeLa-S3 Homo sapiens MA0147.4
BP000610.1 MYC ENCSR000DLR HepG2 Homo sapiens MA0147.4
BP000611.1 MYC ENCSR000DLU endothelial cell of umbilical vein Homo sapiens MA0147.4
BP000612.1 MYC ENCSR000DLZ K562 Homo sapiens MA0147.4
BP000613.1 MYC ENCSR000DMJ MCF-7 Homo sapiens MA0147.4
BP000614.1 MYC ENCSR000DMM MCF-7 Homo sapiens MA0147.4
BP000615.1 MYC ENCSR000DMP MCF-7 Homo sapiens MA0147.4
BP000616.1 MYC ENCSR000DMQ MCF-7 Homo sapiens MA0147.4
BP000617.1 MYC ENCSR000DOM MCF 10A Homo sapiens MA0147.4
Showing 10 profiles of page 1 from 3 pages