Detailed information of deep learning profile BP000621.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000621.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EGJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.03 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.02 0.06 0.00 0.08 0.00 0.00 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.01 0.00 0.08 0.00 0.07 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.05 0.00 -0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 1160 1148 1105 1166 1164 1175 1095 1065 1146 1083 1150 1080 1126 1058 1065 997 964 995 1092 1043 1285 1252 532 168 3728 1 55 37 8 478 866 788 1098 911 996 1092 1180 1099 1093 1122 1150 1061 1199 1078 1204 1160 1155 1155 1100 1135 ]
C [ 1861 1830 1878 1878 1793 1778 1840 1817 1830 1834 1785 1885 1892 2056 1988 1874 1971 2026 1809 2164 1617 1071 4489 5682 6 5910 3 232 19 2356 1583 2295 1901 1954 1776 1781 1828 1769 1777 1814 1729 1921 1806 1789 1847 1841 1762 1828 1837 1858 ]
G [ 1763 1764 1835 1721 1799 1751 1797 1817 1808 1863 1955 1726 1755 1710 1715 1948 1837 1838 2007 1727 2068 2784 654 52 1630 0 5855 2 5871 2082 1577 1376 1823 1967 2030 2000 1794 1917 1951 1800 1923 1793 1767 1869 1815 1746 1760 1795 1820 1788 ]
T [ 1130 1172 1096 1149 1158 1210 1182 1215 1130 1134 1024 1223 1141 1090 1146 1095 1142 1055 1006 980 944 807 239 12 550 3 1 5643 16 998 1888 1455 1092 1082 1112 1041 1112 1129 1093 1178 1112 1139 1142 1178 1048 1167 1237 1136 1157 1133 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.01 0.00 -0.00 0.04 -0.07 0.03 -0.01 -0.04 -0.02 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 -0.00 0.02 0.06 -0.06 0.08 -0.05 0.04 -0.04 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.02 0.01 -0.03 0.04 -0.06 0.08 -0.06 0.07 0.02 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 -0.02 -0.04 -0.01 0.03 -0.07 0.05 -0.00 0.00 0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3319

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3268

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2971

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1412

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1391

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 646

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 156

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 94

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 91

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 83

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 36

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000608.1 MYC ENCSR000DKU GM12878 Homo sapiens MA0147.4
BP000609.1 MYC ENCSR000DLN HeLa-S3 Homo sapiens MA0147.4
BP000610.1 MYC ENCSR000DLR HepG2 Homo sapiens MA0147.4
BP000611.1 MYC ENCSR000DLU endothelial cell of umbilical vein Homo sapiens MA0147.4
BP000612.1 MYC ENCSR000DLZ K562 Homo sapiens MA0147.4
BP000613.1 MYC ENCSR000DMJ MCF-7 Homo sapiens MA0147.4
BP000614.1 MYC ENCSR000DMM MCF-7 Homo sapiens MA0147.4
BP000615.1 MYC ENCSR000DMP MCF-7 Homo sapiens MA0147.4
BP000616.1 MYC ENCSR000DMQ MCF-7 Homo sapiens MA0147.4
BP000617.1 MYC ENCSR000DOM MCF 10A Homo sapiens MA0147.4
Showing 10 profiles of page 1 from 3 pages