Detailed information of deep learning profile BP000621.1

  1. Home
  2. Deep Learning Profile > BP000621.1
This page shows detailed deep learning-derived predictions and motifs for MYC in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000621.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EGJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 -0.00 0.00 0.05 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.07 0.00 0.08 0.00 0.01 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.08 0.00 0.06 0.02 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.03 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1133 1157 1136 1237 1167 1048 1178 1142 1139 1112 1178 1093 1129 1112 1041 1112 1082 1092 1455 1888 998 16 5643 1 3 550 12 239 807 944 980 1006 1055 1142 1095 1146 1090 1141 1223 1024 1134 1130 1215 1182 1210 1158 1149 1096 1172 1130 ]
C [ 1788 1820 1795 1760 1746 1815 1869 1767 1793 1923 1800 1951 1917 1794 2000 2030 1967 1823 1376 1577 2082 5871 2 5855 0 1630 52 654 2784 2068 1727 2007 1838 1837 1948 1715 1710 1755 1726 1955 1863 1808 1817 1797 1751 1799 1721 1835 1764 1763 ]
G [ 1858 1837 1828 1762 1841 1847 1789 1806 1921 1729 1814 1777 1769 1828 1781 1776 1954 1901 2295 1583 2356 19 232 3 5910 6 5682 4489 1071 1617 2164 1809 2026 1971 1874 1988 2056 1892 1885 1785 1834 1830 1817 1840 1778 1793 1878 1878 1830 1861 ]
T [ 1135 1100 1155 1155 1160 1204 1078 1199 1061 1150 1122 1093 1099 1180 1092 996 911 1098 788 866 478 8 37 55 1 3728 168 532 1252 1285 1043 1092 995 964 997 1065 1058 1126 1080 1150 1083 1146 1065 1095 1175 1164 1166 1105 1148 1160 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.01 0.00 -0.00 0.05 -0.07 0.03 -0.01 -0.04 -0.02 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.02 0.07 -0.06 0.08 -0.06 0.04 -0.03 0.01 0.02 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 -0.04 0.04 -0.05 0.08 -0.06 0.06 0.02 -0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 -0.02 -0.04 -0.01 0.03 -0.07 0.04 -0.00 0.00 0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3319

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3268

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2971

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1412

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1391

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 646

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 156

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 94

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 91

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 83

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 36

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000629.1 MYC ENCSR744JJU K562 Homo sapiens MA0147.4
BP000630.1 MYC ENCSR784BVD HepG2 Homo sapiens MA0147.4
Showing 2 profiles of page 3 from 3 pages