Detailed information of deep learning profile BP000620.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000620.1
Cell line/tissue: H1
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EBY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.02 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.05 0.00 0.05 0.00 0.00 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.05 0.00 0.05 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.03 0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 332 376 392 361 379 382 342 373 346 339 370 344 352 343 345 309 326 410 366 492 460 215 25 1650 0 5 25 1 89 332 242 349 340 358 364 405 396 370 359 410 373 375 370 409 407 356 370 354 364 381 ]
C [ 723 654 651 643 662 705 647 684 665 690 671 672 714 735 643 764 705 656 684 610 320 1547 2026 0 2051 0 80 0 945 477 932 664 709 617 640 685 645 642 655 618 677 666 682 688 648 683 702 674 687 646 ]
G [ 644 662 612 694 639 610 675 658 652 666 619 622 606 626 692 642 665 670 684 665 1052 240 2 302 0 2050 3 2050 682 590 491 688 682 717 724 649 625 679 642 665 660 630 657 620 630 641 613 651 611 651 ]
T [ 356 363 400 357 375 358 391 340 392 360 395 417 383 351 375 340 359 319 321 288 223 53 2 103 4 0 1947 4 339 656 390 354 324 363 327 316 389 364 399 362 345 384 346 338 370 375 370 376 393 377 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.01 -0.00 -0.00 0.03 -0.04 0.01 -0.01 -0.03 -0.02 -0.01 -0.00 -0.01 ]
C [ 0.00 0.00 -0.01 0.01 0.05 -0.05 0.05 -0.04 0.03 -0.04 0.01 0.00 0.01 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.04 0.03 -0.05 0.05 -0.06 0.05 0.00 0.00 0.00 0.01 ]
T [ -0.01 -0.00 -0.01 -0.02 -0.03 -0.01 0.01 -0.04 0.03 -0.00 -0.00 0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1120

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 500

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 465

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000629.1 MYC ENCSR744JJU K562 Homo sapiens MA0147.4
BP000630.1 MYC ENCSR784BVD HepG2 Homo sapiens MA0147.4
Showing 2 profiles of page 3 from 3 pages