Detailed information of deep learning profile BP000616.1

  1. Home
  2. Deep Learning Profile > BP000616.1
This page shows detailed deep learning-derived predictions and motifs for MYC in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000616.1
Cell line/tissue: MCF-7
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000DMQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.03 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.05 0.00 0.06 0.00 0.00 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.01 0.00 0.06 0.00 0.05 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.04 -0.00 -0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 1041 1109 1107 1076 1096 1097 1056 1111 1048 1085 1007 1063 1061 1086 1047 947 986 1049 1029 1244 1216 656 277 4062 1 94 70 1 452 942 739 1063 971 962 1061 1089 1055 1055 1018 1079 1059 1091 1001 1093 1074 1047 1109 1049 1033 1091 ]
C [ 1910 1850 1881 1877 1862 1908 1895 1878 1888 1766 1946 1895 2046 2060 1808 2013 2063 1996 2132 1612 988 3888 5561 6 5889 2 140 4 2740 1563 2386 1860 2107 1841 1838 2001 1862 1782 1851 1838 1952 1844 1870 1904 1855 1982 1875 1898 1892 1870 ]
G [ 1834 1865 1808 1853 1857 1834 1834 1868 1881 1989 1853 1857 1779 1693 1980 1893 1807 1906 1753 1912 2835 914 53 1381 0 5808 0 5864 1728 1776 1422 1929 1776 1989 1957 1727 1922 2057 1870 1922 1799 1826 1883 1872 1831 1803 1763 1819 1872 1837 ]
T [ 1119 1080 1108 1098 1089 1065 1119 1047 1087 1064 1098 1089 1018 1065 1069 1051 1048 953 990 1136 865 446 13 455 14 0 5694 35 984 1623 1357 1052 1050 1112 1048 1087 1065 1010 1165 1065 1094 1143 1150 1035 1144 1072 1157 1138 1107 1106 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.01 0.00 0.00 0.03 -0.05 0.02 -0.01 -0.03 -0.02 -0.01 -0.01 -0.01 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 0.01 0.05 -0.04 0.06 -0.02 0.03 -0.02 0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.01 -0.02 0.03 -0.02 0.06 -0.04 0.05 0.01 0.00 0.00 0.01 0.01 ]
T [ -0.00 -0.01 -0.00 -0.01 -0.01 -0.04 -0.01 0.02 -0.05 0.04 0.00 0.00 0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4318

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2505

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1908

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1623

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1371

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 842

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 576

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 372

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 249

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 159

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 126

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 62

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 50

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 23

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000608.1 MYC ENCSR000DKU GM12878 Homo sapiens MA0147.4
BP000609.1 MYC ENCSR000DLN HeLa-S3 Homo sapiens MA0147.4
BP000610.1 MYC ENCSR000DLR HepG2 Homo sapiens MA0147.4
BP000611.1 MYC ENCSR000DLU endothelial cell of umbilical vein Homo sapiens MA0147.4
BP000612.1 MYC ENCSR000DLZ K562 Homo sapiens MA0147.4
BP000613.1 MYC ENCSR000DMJ MCF-7 Homo sapiens MA0147.4
BP000614.1 MYC ENCSR000DMM MCF-7 Homo sapiens MA0147.4
BP000615.1 MYC ENCSR000DMP MCF-7 Homo sapiens MA0147.4
BP000617.1 MYC ENCSR000DOM MCF 10A Homo sapiens MA0147.4
BP000618.1 MYC ENCSR000DOS MCF 10A Homo sapiens MA0147.4
Showing 10 profiles of page 1 from 3 pages