Detailed information of deep learning profile BP000616.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000616.1
Cell line/tissue: MCF-7
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000DMQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 -0.00 -0.00 0.04 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.05 0.00 0.06 0.00 0.01 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.06 0.00 0.05 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.03 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1106 1107 1138 1157 1072 1144 1035 1150 1143 1094 1065 1165 1010 1065 1087 1048 1112 1050 1052 1357 1623 984 35 5694 0 14 455 13 446 865 1136 990 953 1048 1051 1069 1065 1018 1089 1098 1064 1087 1047 1119 1065 1089 1098 1108 1080 1119 ]
C [ 1837 1872 1819 1763 1803 1831 1872 1883 1826 1799 1922 1870 2057 1922 1727 1957 1989 1776 1929 1422 1776 1728 5864 0 5808 0 1381 53 914 2835 1912 1753 1906 1807 1893 1980 1693 1779 1857 1853 1989 1881 1868 1834 1834 1857 1853 1808 1865 1834 ]
G [ 1870 1892 1898 1875 1982 1855 1904 1870 1844 1952 1838 1851 1782 1862 2001 1838 1841 2107 1860 2386 1563 2740 4 140 2 5889 6 5561 3888 988 1612 2132 1996 2063 2013 1808 2060 2046 1895 1946 1766 1888 1878 1895 1908 1862 1877 1881 1850 1910 ]
T [ 1091 1033 1049 1109 1047 1074 1093 1001 1091 1059 1079 1018 1055 1055 1089 1061 962 971 1063 739 942 452 1 70 94 1 4062 277 656 1216 1244 1029 1049 986 947 1047 1086 1061 1063 1007 1085 1048 1111 1056 1097 1096 1076 1107 1109 1041 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 0.00 0.00 0.00 0.04 -0.05 0.02 -0.01 -0.04 -0.01 -0.01 -0.00 -0.01 -0.00 ]
C [ 0.01 0.01 0.00 0.00 0.01 0.05 -0.04 0.06 -0.02 0.03 -0.02 0.01 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.02 -0.02 0.03 -0.02 0.06 -0.04 0.05 0.01 -0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.01 -0.01 -0.01 -0.02 -0.03 -0.01 0.02 -0.05 0.03 0.00 0.00 0.01 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4318

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2505

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1908

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1623

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1371

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 842

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 576

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 372

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 249

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 159

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 126

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 62

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 50

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 23

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000629.1 MYC ENCSR744JJU K562 Homo sapiens MA0147.4
BP000630.1 MYC ENCSR784BVD HepG2 Homo sapiens MA0147.4
Showing 2 profiles of page 3 from 3 pages