Detailed information of deep learning profile BP000614.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000614.1
Cell line/tissue: MCF-7
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000DMM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.01 0.00 0.00 0.01 0.05 0.00 0.06 0.00 0.01 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.01 0.01 0.01 0.01 0.00 0.00 0.00 0.06 0.00 0.05 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.02 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1005 962 967 962 948 998 952 905 1056 976 968 955 980 933 980 894 868 964 932 949 1142 1546 781 37 5223 4 330 338 10 374 672 1043 959 959 870 1034 916 884 958 953 959 868 924 930 946 967 904 934 947 922 ]
C [ 1807 1818 1789 1801 1815 1745 1750 1793 1748 1754 1713 1801 1841 1894 1857 1649 2165 1979 1553 1862 1433 1359 2279 5537 14 5250 4 1229 59 877 2895 1777 1796 1544 1909 1809 1798 1728 1716 1755 1843 1937 1873 1839 1846 1744 1855 1885 1754 1858 ]
G [ 1838 1927 1947 1935 1937 1993 1940 1991 1928 1992 2074 1960 1946 1938 1881 2183 1803 1829 2335 2046 2364 1875 2153 10 217 9 5250 21 5350 3753 990 1762 1904 2274 2047 1927 1994 2106 2056 1903 1909 1896 1864 1911 1851 1965 1891 1850 1898 1892 ]
T [ 936 879 883 888 886 850 944 897 854 864 831 870 819 821 868 860 750 814 766 729 647 806 373 2 132 323 2 3998 167 582 1029 1004 927 809 760 816 878 868 856 975 875 885 925 906 943 910 936 917 987 914 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.01 0.03 -0.06 0.01 -0.02 -0.04 -0.02 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 ]
C [ 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.02 0.02 0.01 0.01 0.01 0.05 -0.04 0.07 -0.03 0.04 -0.01 0.02 0.02 0.02 0.02 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.02 0.02 0.02 -0.01 0.04 -0.02 0.07 -0.04 0.05 0.02 0.01 0.01 0.01 0.02 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 ]
T [ -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.02 -0.04 -0.02 0.01 -0.06 0.03 -0.01 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1550

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1461

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1036

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 532

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 223

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000629.1 MYC ENCSR744JJU K562 Homo sapiens MA0147.4
BP000630.1 MYC ENCSR784BVD HepG2 Homo sapiens MA0147.4
Showing 2 profiles of page 3 from 3 pages